Gene Strop_2430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2430 
Symbol 
ID5058893 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2726796 
End bp2727707 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content70% 
IMG OID640474689 
ProductABC transporter related 
Protein accessionYP_001159255 
Protein GI145594958 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0400473 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.675282 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATCCA TCGACAGTCC GGCGATCGTG CTGGACGCCG TGAGTAAAGC GTATGGCGAG 
GTGAGGGCGG TCGACGAGAT CTCCATCTCG ATCGGCCGCG GCGAGTTCTT CGGCCTGCTC
GGCCCCAACG GTGCCGGCAA GACCACCCTG ATCGAAATGA TCGAGGGACT GCGCATCCCC
GACACCGGCG CCATCACCGT GCTGGGCATG TCGCCAGCCC CACGCAACCT CGACCTGCTG
CCCCTGATCG GGGTGCAGAC CCAGCGATCG GCCTTCTTCA CCCGGCTGAC CGCCCGCGAG
CACCTGGTGA CCGTCGCCGC CCTCTACGGC CTTCCCCCCG CCACCGCGGA GAAGGCGCTG
GACCTGGTCG GGTTGACCGG TTCGGGTGAC GTCCGGGTCA CCAAGATCTC CGGCGGTCAG
CGCCAGCGCC TCGCCATCGC CTCCACGCTC GTCCACGACC CCGAGGTGGT CTTCCTGGAC
GAACCCACCG CCGCGCTGGA CCCGGAGGCC CGCCGTGACC TCGGCCAGAT GCTGCGCAAC
CTGAAGGCGA TCGGCAAGAC CATCGTCTAC ACCACCCACC ACCTGGACGA GGCGCAGACC
CTCTGCGACC GGGTCGCGAT CCTCTCCGCC GGGCGCGTCC TCGCGCTCGA CAGCCCCCGC
GAGCTGATCG CCCGCTCCGG CATCGGTACC CGACTGGTCA TCCCCGCCGG GCGGCTCAGT
CCGGAACAGG CCGGCACCCT CGACGGCGTC AGCGGGGTCG CCGTCGAGGA CGGCATGCTC
GTGCTGCGGA CCGCGCACAC GGCCCGGGTG CTCGCCGCCC TCGACGGCGA AGCCGACCTG
GATGACGTGG AGACCCGACC GGCCACCTTG GAAGACGTCT ACCTCGAGCT GATCGGAGCG
CCGCAGGCAT GA
 
Protein sequence
MSSIDSPAIV LDAVSKAYGE VRAVDEISIS IGRGEFFGLL GPNGAGKTTL IEMIEGLRIP 
DTGAITVLGM SPAPRNLDLL PLIGVQTQRS AFFTRLTARE HLVTVAALYG LPPATAEKAL
DLVGLTGSGD VRVTKISGGQ RQRLAIASTL VHDPEVVFLD EPTAALDPEA RRDLGQMLRN
LKAIGKTIVY TTHHLDEAQT LCDRVAILSA GRVLALDSPR ELIARSGIGT RLVIPAGRLS
PEQAGTLDGV SGVAVEDGML VLRTAHTARV LAALDGEADL DDVETRPATL EDVYLELIGA
PQA