Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_2430 |
Symbol | |
ID | 5058893 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 2726796 |
End bp | 2727707 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640474689 |
Product | ABC transporter related |
Protein accession | YP_001159255 |
Protein GI | 145594958 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0400473 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.675282 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCATCCA TCGACAGTCC GGCGATCGTG CTGGACGCCG TGAGTAAAGC GTATGGCGAG GTGAGGGCGG TCGACGAGAT CTCCATCTCG ATCGGCCGCG GCGAGTTCTT CGGCCTGCTC GGCCCCAACG GTGCCGGCAA GACCACCCTG ATCGAAATGA TCGAGGGACT GCGCATCCCC GACACCGGCG CCATCACCGT GCTGGGCATG TCGCCAGCCC CACGCAACCT CGACCTGCTG CCCCTGATCG GGGTGCAGAC CCAGCGATCG GCCTTCTTCA CCCGGCTGAC CGCCCGCGAG CACCTGGTGA CCGTCGCCGC CCTCTACGGC CTTCCCCCCG CCACCGCGGA GAAGGCGCTG GACCTGGTCG GGTTGACCGG TTCGGGTGAC GTCCGGGTCA CCAAGATCTC CGGCGGTCAG CGCCAGCGCC TCGCCATCGC CTCCACGCTC GTCCACGACC CCGAGGTGGT CTTCCTGGAC GAACCCACCG CCGCGCTGGA CCCGGAGGCC CGCCGTGACC TCGGCCAGAT GCTGCGCAAC CTGAAGGCGA TCGGCAAGAC CATCGTCTAC ACCACCCACC ACCTGGACGA GGCGCAGACC CTCTGCGACC GGGTCGCGAT CCTCTCCGCC GGGCGCGTCC TCGCGCTCGA CAGCCCCCGC GAGCTGATCG CCCGCTCCGG CATCGGTACC CGACTGGTCA TCCCCGCCGG GCGGCTCAGT CCGGAACAGG CCGGCACCCT CGACGGCGTC AGCGGGGTCG CCGTCGAGGA CGGCATGCTC GTGCTGCGGA CCGCGCACAC GGCCCGGGTG CTCGCCGCCC TCGACGGCGA AGCCGACCTG GATGACGTGG AGACCCGACC GGCCACCTTG GAAGACGTCT ACCTCGAGCT GATCGGAGCG CCGCAGGCAT GA
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Protein sequence | MSSIDSPAIV LDAVSKAYGE VRAVDEISIS IGRGEFFGLL GPNGAGKTTL IEMIEGLRIP DTGAITVLGM SPAPRNLDLL PLIGVQTQRS AFFTRLTARE HLVTVAALYG LPPATAEKAL DLVGLTGSGD VRVTKISGGQ RQRLAIASTL VHDPEVVFLD EPTAALDPEA RRDLGQMLRN LKAIGKTIVY TTHHLDEAQT LCDRVAILSA GRVLALDSPR ELIARSGIGT RLVIPAGRLS PEQAGTLDGV SGVAVEDGML VLRTAHTARV LAALDGEADL DDVETRPATL EDVYLELIGA PQA
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