Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_2387 |
Symbol | |
ID | 5058850 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 2680207 |
End bp | 2680815 |
Gene Length | 609 bp |
Protein Length | 202 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640474646 |
Product | CDP-alcohol phosphatidyltransferase |
Protein accession | YP_001159212 |
Protein GI | 145594915 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0558] Phosphatidylglycerophosphate synthase |
TIGRFAM ID | [TIGR00560] CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGTCGCAGC GGCCGGCTCG ATTTGGCACT CCGCACGCCT CCGGCCACCG CACCAATCAG GTCCTCACGC TGCCGAACCT GATCAGCTTC GTCCGACTTC TCGGTGTTCC GGTCTTTCTC TACCTACTGC TGGTGGCCCG CGCCGATGTC GCCGCGATCG TGGTGCTGGC GGTCGGCGGC ACCACCGACT GGGTGGACGG CTGGGCCGCC CGGCGACTCC GGCAGGTGAG TCGGCTGGGC GAGCTGCTTG ATCCATTCGT GGACCGCCTC TACATCCTGG CCACGCTGGT CGCGTTCACC CTCCGGGAGG TGGTGCCGTG GCAGTTCACG GTGGCGCTGC TCGCCCGTGA GGTGCTGCTG CTGGGTTCCC TCGGCACGTT ACGTCGCTAC GGGTACGGGC CGCCCCCGGT GCACTACGTG GGCAAGACGG CGACATTTCT GTTGTTGGCC GCGTTCCCCA TCCTGTTGCT GGCGACGGCG GTGCCGGCAA CAGTTGTCAG CGCGGTCGGC TGGAGCCTGG CCTGGTGGGG CCTGACGTTG TACTGGGTCG CTGGCGCGAT GTACGTGGTG CAGGCCAGGC GGCTGGTGCG GGCAGCGAGG GCACGATGA
|
Protein sequence | MSQRPARFGT PHASGHRTNQ VLTLPNLISF VRLLGVPVFL YLLLVARADV AAIVVLAVGG TTDWVDGWAA RRLRQVSRLG ELLDPFVDRL YILATLVAFT LREVVPWQFT VALLAREVLL LGSLGTLRRY GYGPPPVHYV GKTATFLLLA AFPILLLATA VPATVVSAVG WSLAWWGLTL YWVAGAMYVV QARRLVRAAR AR
|
| |