| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2373 |
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| Symbol | |
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| ID | 5058836 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 2666756 |
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| End bp | 2667541 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640474632 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001159198 |
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| Protein GI | 145594901 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.812252 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.718016 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGCCTATCC CTACTTCCCT GAACGGGCTC GCTGCCCCGG CCCAGCCCTC CGCCTCACCC
CGTGTCGCGA TCGTCACCGG CGGCTCGCGC GGCATCGGCC GCCAGACCGC CGGCCGGCTG
GCCGCCGACG GGTACGCCGT CGTGGTCGGC TATGCCGGCA ACCAGGACGA AGCCGAAGCC
GCCGTCAAGG AGGCCGCCGC CAACGGCAGC GTCCGGGCGA TAGCGGTACG CGCCGACGTC
GCCGACGAAC ACGCCGTCGC GGCTCTGTTC GACGCGGCCG AGGCAGAGTT CGGCGGTGTC
GACGTCGTCG TGCACGCAGC CGGGCGGGCA CACATGGCGC CGATCGCCGA GCTGGACCTG
GCCGTCCTGG ACGACCTGCA CCGCACCAAC ATCCGCGGCA CGTTCGTCGT CGTCCAGCAG
GCCGCCCGTC GGGTGCGTCC CGGCGGGGCG ATCGTGACGT TCTCCACGTC CGTGGTGGGG
CTGGCCTTCC CGAACTACGG CGCGTACTCC GCCAGCAAGG GCGCGGTCGA GGCGCTGACG
CTGATCCTGG CCCGGGAGCT GCGGGGCCGG CACGTCACCG CCAACGCCGT CGCGCCCGGC
CCCACGGCCA CCGACCTGTT CCTGGACGGA AAGGACGAGG AGACCATCGC CCGTCTGGCC
GCCCAGCCCC CGCTGGAGCG CCTCGGTACC CCGTCCGACA TTGCCGAGGT CGTCGCGTTC
CTGGCCTCCC CGGCCGGCCA CTGGATCAAC GGACAGGTCG TCCGCGCCAA CGGCGGAATC
ATCTGA
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| Protein sequence | MPIPTSLNGL AAPAQPSASP RVAIVTGGSR GIGRQTAGRL AADGYAVVVG YAGNQDEAEA
AVKEAAANGS VRAIAVRADV ADEHAVAALF DAAEAEFGGV DVVVHAAGRA HMAPIAELDL
AVLDDLHRTN IRGTFVVVQQ AARRVRPGGA IVTFSTSVVG LAFPNYGAYS ASKGAVEALT
LILARELRGR HVTANAVAPG PTATDLFLDG KDEETIARLA AQPPLERLGT PSDIAEVVAF
LASPAGHWIN GQVVRANGGI I
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