| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2361 |
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| Symbol | |
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| ID | 5058824 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 2657065 |
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| End bp | 2658849 |
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| Gene Length | 1785 bp |
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| Protein Length | 594 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640474621 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001159187 |
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| Protein GI | 145594890 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.213022 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCTTG GATCGGCCGG CTGGTCGAGC TCCTCACCCA AGTCGGTCAC GAGTCTCTCG
ATGCGCTCGG CGGTGCAGCG GTGGCGTTCG ACATCTCGCT GCCAGCGGCG TCGACGGCGA
GGTTGTGTTC GAGTCGTCGC GACGAACTTC GCGCAGCTCA GGTACGGGTC CCTGCCCGGG
AGACGTGTGA CCGCCCCTGG GCTGGGGACG TGTGACCTGG TTAACCAGGC ACCGTATCTA
TACGCCGAGT ACAGTTACGG TATGCAAATT GCGGAAACGG ACCGGAAGGC GCCGACGAGG
GCGCAGCGGT GGGGGTTGCT GGTCACGGTC AGCGCGGGAC TATTGTTGAT CACGTTGGAC
CATTCTGTCC TGTACACCGC CCTGCCGACG CTGACGGCCG GTCTCGGGGC CACCGGCACG
CAAAGTTTGT GGATCATCAA CGCCTACCCG GTGGTGATGG CGGGGCTGCT GCTGGGCAGC
GGCACGCTGG GCGACCGGGT CGGGCACCGA CGGATGTTCC TGGTCGGGCT GTTCGTGTTC
GCCGTCGCCT CCCTGCTGGC GGCGTTCGCG CCCAACACCG GGGTGTTGAT CGCCGCACGG
GCGTTACTCG CGGTGGGCGC GGCGACGATG ATGCCCGCCA CCCTGGCCCT GATCCGGGTG
ACGTTCCAGG TGGAGCGGGA ACGCAACGTC GCGATCGCGG TGTGGGGTTC CCTGGCCGTG
GTGGGTGCCG CGCTCGGCCC GATCGTGGGC GGGGCGCTGT TGGAGACGTT CTGGTGGGGT
TCGGTGTTCC TGGTCAACGT TCCGGTCGCC GCCGCCGCCA TGGCCGCGAC GCTGCTCGTC
GCGCCGCGCA ACGACCCGGA CCCGAGCAAG CGATGGGACC TGGTGTCCTC GTTGCAGGTG
ATGGTCGGCC TGGTCGGCGC GGTGTTTGCG ATCAAGGAAC TCGCACACCA ACCGCCGTCG
CCGACCGTGC TGACGATCGC GGTGCTCGCC TCGGCCGTCG GGCTTACCCT CTTCGTCCGC
CGGCAGCGGC GCCTGGCCGA CCCACTGCTG GACTTCGCGA TCTTCCGTAA CCCGGCCTTC
ACCTCGGGGG TGCTGGCCGC CGCGCTCGCC CTGTTCGCCA TCACCGGGCT CCAACTGGTC
ACCACCCAGC GGTTCCAGCT CGTCGCGGGT TTCACCCCCC TGCAAGCGGG CCTGCTGGTC
GCGGCGGTCG CGGCCGGCGC GTTGCCGACC GCGCTGCTGG GCGGCGCGGT CCTGCACCGC
ACCGGGCTGC TGCCACTGAT CACCGGCGGC CTCACCCTCG CCGTCCCCGG CGTCATCCTC
GTCGCCCTCG GCCTGCACGC TGGCCTCCCC GTCCTGGTCA CCGGAATGAT CGTCACCGGC
GCCGGACTCG GCGCGACGAT GTCCGTCGCC TCCACCGCGA TCGTCGGCAA CGCCCCCGTC
CGCCGCGCCG GCATGGCGGC GTCCGTCGGG GAAACCTCCT ACGAGTTCGG GGCGCTGACC
GCCGTCGCGT TGCTCGGCAG CCTCGTCACC GTCGTCTACA CCACCGTGGT CCGCCTCCCG
CCCGGCGCGC CCACCGTGGC CGGCGACAGC CTGCCCGACG CCCTCGCCGC AGCCGGCGGC
GACCAGGCCG TCATCACCGC CGCGCACACC GCCTACGACA TCGGCTACCT GATCACTATC
GCTGTCGTGG CCGTCGCCCT CACCGCCGGC GCGGCACTCA CCGGACGACT CCTGCGTCAC
CACGGCCCCG GCACTGCATC CGGCGTCATT CCCGCCGAGC ACTAA
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| Protein sequence | MALGSAGWSS SSPKSVTSLS MRSAVQRWRS TSRCQRRRRR GCVRVVATNF AQLRYGSLPG
RRVTAPGLGT CDLVNQAPYL YAEYSYGMQI AETDRKAPTR AQRWGLLVTV SAGLLLITLD
HSVLYTALPT LTAGLGATGT QSLWIINAYP VVMAGLLLGS GTLGDRVGHR RMFLVGLFVF
AVASLLAAFA PNTGVLIAAR ALLAVGAATM MPATLALIRV TFQVERERNV AIAVWGSLAV
VGAALGPIVG GALLETFWWG SVFLVNVPVA AAAMAATLLV APRNDPDPSK RWDLVSSLQV
MVGLVGAVFA IKELAHQPPS PTVLTIAVLA SAVGLTLFVR RQRRLADPLL DFAIFRNPAF
TSGVLAAALA LFAITGLQLV TTQRFQLVAG FTPLQAGLLV AAVAAGALPT ALLGGAVLHR
TGLLPLITGG LTLAVPGVIL VALGLHAGLP VLVTGMIVTG AGLGATMSVA STAIVGNAPV
RRAGMAASVG ETSYEFGALT AVALLGSLVT VVYTTVVRLP PGAPTVAGDS LPDALAAAGG
DQAVITAAHT AYDIGYLITI AVVAVALTAG AALTGRLLRH HGPGTASGVI PAEH
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