Gene Strop_2358 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2358 
Symbol 
ID5058821 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2652734 
End bp2654167 
Gene Length1434 bp 
Protein Length477 aa 
Translation table11 
GC content69% 
IMG OID640474618 
Producthypothetical protein 
Protein accessionYP_001159184 
Protein GI145594887 
COG category 
COG ID 
TIGRFAM ID[TIGR01376] Chlamydial polymorphic outer membrane protein repeat 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.640506 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.200266 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCAGA GCAGGAGACT CCCCCGCCCG TCCGGGGTGC GCGGTCGACG CCGCGCACCC 
CGCGCCGTCG CGGCGGTCAG CGCCGTGGCC CTCACCGGAG TCGCTGGCCT GGCCGGCGCT
GGATCGGCCA CCGCGTACCA GCCCTCGCCC GACCGCGAGG TCACTGGTGG CCAGCCGCAC
CGTGAGTGGT CGAAGGTCGA CGGCGAGTGG GGTGGTGACT GGGGAAAGGC CGGTCACTCG
GGCTGGAAGG GTGATGGCCA TGGTGACGGG AAGGACAAGG GCACCCCGGT GCCCTGCGAC
CCCAACGCGC TGATCGCCGC CATCACCGCG GCGAACCAGG CCGGCGGCGG CACCCTGCGC
CTCGCCGAGA AGTGCGTCTA CACCCTGACG GTCAACCAGG ACGACAACGG ACTACCCCCG
GTCTTCCAGC CGATCACGAT CTACGGCCAG GGCGCCACCA TCATCCGGGC CGCCGCCGCC
GACAACTTCC GCATCTTCGA GGTCATCACC GGCGGCGACC TCACCCTCAA AGACCTCACC
GTCGCCGGCG GAAGGCTCGA GGGCAACAAC GACGACGGCG GCGGCATCCG CGCTGGCGAA
GGCACCCGAC TGACCCTCGA ACGCGTCACC GTCCGGGACA ACATGACCCT GGGCGGCAAC
GGCGACGGCG GCGGCGTCTG GGGTGACCGG AGCAAAGTCA CGATCACCAA GAGCACCATC
ACCCGCAACA CCGCCGGCGA TGAGGGCGGC GGCGTCTCCA GCGACCACGG CACCTTCGCG
ATCAGCAAGT CGAAGCTGAC CAACAACACC GCCGGCACCA CCGGCGGTGG GTTCTCCAAC
GACGAGGGCT CCGCCACTAT CAGCCACACC CTGATCAGCG ACAACACCGC TACCGACGGT
GGGGGCGTCG ACAACGACGG CGACCTCTCC GAGATCGTCC ACAGCACCAT CACCCGCAAC
ACCGCCAGCG GACTCGGCGG CGGCATCTAC GACAACGGCG AGGAAGCCCT TCTACTCCAG
CACGTCAAGG TCGCCGAGAA CACCGCCACC TCCGGTGGGG GGCTCTACCT CACCACCGAT
CTCGGTGTCA CCGTTGAGGA CAGCAAGATC GTGTACAACA CCGCCACCAC CGGCGACGGC
GGCGGCATCG CCATCATCGG CGACGGCGGC GACCCCGTGG TGGCCCTGCG CCGTACCACC
GTCTCCGGCA ACCAAGCAGG CGGAGCGGCC GGCGGCATCT TCTTCAACCC CTCCGACCCC
ACCACCGTCC TCACCCTCAC CGACGTCCGG GTCACCGACA ACCTCGCCCA AAACGAACCC
GGCGGCGTCT ACAACAACGG CGTGATCGAC GTCTTCGGCA AGGTCATCAT CATCAACAAC
CGACCCACCA ACTGCACCGG CAGCCCCAAC CCCGTACCCA CCTGCTTCGG CTGA
 
Protein sequence
MLQSRRLPRP SGVRGRRRAP RAVAAVSAVA LTGVAGLAGA GSATAYQPSP DREVTGGQPH 
REWSKVDGEW GGDWGKAGHS GWKGDGHGDG KDKGTPVPCD PNALIAAITA ANQAGGGTLR
LAEKCVYTLT VNQDDNGLPP VFQPITIYGQ GATIIRAAAA DNFRIFEVIT GGDLTLKDLT
VAGGRLEGNN DDGGGIRAGE GTRLTLERVT VRDNMTLGGN GDGGGVWGDR SKVTITKSTI
TRNTAGDEGG GVSSDHGTFA ISKSKLTNNT AGTTGGGFSN DEGSATISHT LISDNTATDG
GGVDNDGDLS EIVHSTITRN TASGLGGGIY DNGEEALLLQ HVKVAENTAT SGGGLYLTTD
LGVTVEDSKI VYNTATTGDG GGIAIIGDGG DPVVALRRTT VSGNQAGGAA GGIFFNPSDP
TTVLTLTDVR VTDNLAQNEP GGVYNNGVID VFGKVIIINN RPTNCTGSPN PVPTCFG