Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_2357 |
Symbol | |
ID | 5058820 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 2652130 |
End bp | 2652633 |
Gene Length | 504 bp |
Protein Length | 167 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640474617 |
Product | peptide deformylase |
Protein accession | YP_001159183 |
Protein GI | 145594886 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.408741 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.109738 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGATGC GCCCGATCCG GATCATCGGC GACCCGGTGC TTCGCACTCC CGCCGCGCCG GTCACCAGCT TCGATGCCGA CCTACGCGCA CTCGTCGCCG ACCTGATGGA CACGCTGCTC GGCGCCCCGG GTCGCGCTGG GGTGGCCGCC CCGCAGATCG GCGTTTCCGC CCAGGTGTTC GTCTACGACG CCGACGGCCA CCGCGGCCAC CTCATCAACC CCACGCTGGA ACTCGGCGAC GACCGGCAGG ACGACGACGA GGGCTGCCTG TCGATCCCCG GCCTGTACTT CCCGACCCCG CGAGCCATGC GCGCCACCGC ACGCGGTATG GACCAGCACG GGCAACCGTT GACCATCACC GGCACCGGTT TCCTCGCCCG CGCTCTGCAA CACGAGACCG ACCACCTCGC TGGCCGCCTC TACGTGGACA CGCTGCGCGG GGAGACCCGT CGCCGGGCCC TGCGGGAAGT CCGCGCCGGC CACTACGCGC CGCGTAGTGG GTGA
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Protein sequence | MTMRPIRIIG DPVLRTPAAP VTSFDADLRA LVADLMDTLL GAPGRAGVAA PQIGVSAQVF VYDADGHRGH LINPTLELGD DRQDDDEGCL SIPGLYFPTP RAMRATARGM DQHGQPLTIT GTGFLARALQ HETDHLAGRL YVDTLRGETR RRALREVRAG HYAPRSG
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