Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_2354 |
Symbol | |
ID | 5058817 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 2649650 |
End bp | 2650258 |
Gene Length | 609 bp |
Protein Length | 202 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640474614 |
Product | regulatory protein, TetR |
Protein accession | YP_001159180 |
Protein GI | 145594883 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.291853 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0619707 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGTGAACA TGTATGTACC CGAGGATCGC ACCGCGAAGG CGATCATTCG GGATGTCGCC CTGGAGCTGT TCGGTGAGCA GTGGCCGGCG GCGGCGTCAC TCAAGCAGGT GGCGGAGCGC GCGCAGGTCT CGCAGTCGCT GATCATCAAA CACTACGGGT CCCGCGACGG TCTGGTCGCC GCGGTGGACA CCCACGTGCT GGGCCTGTTG GGCAACGCGT TGGAGGCGCT CGCCGGCACC GACGGAGCCG GTCCACCCGA TTGCTTCCTC GCCTCGGCCG ACGCGCTCCG GGCGCCGGCA ACCACCCGCT ACCTCGCGCA CCTGCTCATC GGCGACACGG CACGCTCGGT CGAGGCCTAC CGCAGGATGC AGGAGTTCAC CGACTCGCTC GTGCGCCGCA TGGCCGAGGC CGGCGCGGTC GCCGAGGACA CGGATCGGGC GCAGCTCTCG ATCGTGCTCC TGGCCCACGA GCTGTCGATC ATTTTGTTGC GGGATCGCAT CGCCGACGTG CTCGGCACGG ACCCGGTGGG TCGCGACGGC CTCGGACGCT GGTGGGACAC GATCGACCAG CTCTATTCGG GTGCCGCGAT CCGGAAGCCG TCCGGCTGA
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Protein sequence | MVNMYVPEDR TAKAIIRDVA LELFGEQWPA AASLKQVAER AQVSQSLIIK HYGSRDGLVA AVDTHVLGLL GNALEALAGT DGAGPPDCFL ASADALRAPA TTRYLAHLLI GDTARSVEAY RRMQEFTDSL VRRMAEAGAV AEDTDRAQLS IVLLAHELSI ILLRDRIADV LGTDPVGRDG LGRWWDTIDQ LYSGAAIRKP SG
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