Gene Strop_2354 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2354 
Symbol 
ID5058817 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2649650 
End bp2650258 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content69% 
IMG OID640474614 
Productregulatory protein, TetR 
Protein accessionYP_001159180 
Protein GI145594883 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.291853 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0619707 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTGAACA TGTATGTACC CGAGGATCGC ACCGCGAAGG CGATCATTCG GGATGTCGCC 
CTGGAGCTGT TCGGTGAGCA GTGGCCGGCG GCGGCGTCAC TCAAGCAGGT GGCGGAGCGC
GCGCAGGTCT CGCAGTCGCT GATCATCAAA CACTACGGGT CCCGCGACGG TCTGGTCGCC
GCGGTGGACA CCCACGTGCT GGGCCTGTTG GGCAACGCGT TGGAGGCGCT CGCCGGCACC
GACGGAGCCG GTCCACCCGA TTGCTTCCTC GCCTCGGCCG ACGCGCTCCG GGCGCCGGCA
ACCACCCGCT ACCTCGCGCA CCTGCTCATC GGCGACACGG CACGCTCGGT CGAGGCCTAC
CGCAGGATGC AGGAGTTCAC CGACTCGCTC GTGCGCCGCA TGGCCGAGGC CGGCGCGGTC
GCCGAGGACA CGGATCGGGC GCAGCTCTCG ATCGTGCTCC TGGCCCACGA GCTGTCGATC
ATTTTGTTGC GGGATCGCAT CGCCGACGTG CTCGGCACGG ACCCGGTGGG TCGCGACGGC
CTCGGACGCT GGTGGGACAC GATCGACCAG CTCTATTCGG GTGCCGCGAT CCGGAAGCCG
TCCGGCTGA
 
Protein sequence
MVNMYVPEDR TAKAIIRDVA LELFGEQWPA AASLKQVAER AQVSQSLIIK HYGSRDGLVA 
AVDTHVLGLL GNALEALAGT DGAGPPDCFL ASADALRAPA TTRYLAHLLI GDTARSVEAY
RRMQEFTDSL VRRMAEAGAV AEDTDRAQLS IVLLAHELSI ILLRDRIADV LGTDPVGRDG
LGRWWDTIDQ LYSGAAIRKP SG