| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2336 |
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| Symbol | |
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| ID | 5058799 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 2630434 |
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| End bp | 2631162 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640474596 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001159162 |
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| Protein GI | 145594865 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00699657 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGAATCCGG TCACCGTCAT CACCGGCGGC AGCCGCGGCA TCGGCGCCGC CACCGCCCGC
CGCCTCGCCC ACGCCGGCCA CCACATCGCC TTCTCCTACC AACGCGACCA CACCGCCGCC
AACACCGTCC TCGCCGAGCT ACACGCCATC GGCGCCACCG CCATCGCCGT ACCCGCCGAC
ACCCGCGACC CCGACCAACT CGCCACCCTG TTCACCGCCG CCGCCGACCT CGGCGACCTC
ACCGGCCTGG TCAACAACGC CGGCGTCACC AGCCTCATCG GCCCCTTCGT CGACCTCGAC
CCCACCGACC TACGCCACGT CGTCGACGTC AACCTCATCG GCTACATCCT CGCCGCCCAA
CAGGCCGCCC GGCGGATGCC CACCGGTGGC GCCATCGTCA ACATCTCCTC TGCCGCCGCC
ACCCTCGGCG CGCCCGGCGA ATACGTCCAC TACGCCGCCG TCAAAGCAGG CACCGACGCC
CTCACCATCG GACTGGCCAA GGAGCTTGCC CCCCACGGCA TCCGCGTCAA CGCCGTCGCC
CCCGGCATCA TCCGCACCGA CATCCACACC CACTCCGGCC AGCCCGACCG GGCCGATCAG
GCCGCCGCCC GCATCCCACT CGGACGCGCC GGCGAACCCG ACGAAGTCGC CGCCGCCATC
GCCTGGCTAC TCGGACCCGA CGCCAGCTAC ACCACCGGCA CCATCCTCCG CGTCAGCGGC
GGCCTCTGA
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| Protein sequence | MNPVTVITGG SRGIGAATAR RLAHAGHHIA FSYQRDHTAA NTVLAELHAI GATAIAVPAD
TRDPDQLATL FTAAADLGDL TGLVNNAGVT SLIGPFVDLD PTDLRHVVDV NLIGYILAAQ
QAARRMPTGG AIVNISSAAA TLGAPGEYVH YAAVKAGTDA LTIGLAKELA PHGIRVNAVA
PGIIRTDIHT HSGQPDRADQ AAARIPLGRA GEPDEVAAAI AWLLGPDASY TTGTILRVSG
GL
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