Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_2258 |
Symbol | |
ID | 5058721 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 2552848 |
End bp | 2553990 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640474520 |
Product | acyl-CoA dehydrogenase domain-containing protein |
Protein accession | YP_001159086 |
Protein GI | 145594789 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.157301 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.10942 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGTCG ACCGGATCCT CCCCACCGAC GAGGCCCACG ACCTGTTGGA CCTGGCCACC GAACTCGCTG ACCGGGAGCT CGCGCCGAAG GCCGCCGACC ACGAGGAGCG CGCCGAGTTC CCCCGGGAGG TGCTGCGTAC CCTGGGTCGG TCGGGCCTGC TCGGCTTGCC GTACGCGGAG GAGTACGGCG GCGCCGCCCA GCCGTACGAG GTGTACCTAC AGGTGCTGGA GATCCTCGCC AGCCGCTGGC TCGCGGTCGC CGAGGCAATC AGCGTCCACA CCCTGTCCTG CTTCCCGCTC GCCGAGTACG GCACGGCGCA GCAGCGGAAG CTGCTGCCCG ATCTGATCGG TGGGGAGCTG CTGGGCGCGT ACTGCCTGTC CGAGCCGCAG GGCGGTTCGG ATGCCGCACA TCTGACCACT CGGGCCGTCC CCGAGGGGGA GGAGTACATC GTCTCCGGTA CGAAGGCGTG GATCACGCAC GCTCACGTGG CGGACTTCTA CAACATCTTC TGCCGTACCG GCGGTGCCGG GGCGCGGGGA ATCTCCTGTC TGCTCGCCGA CCGGAATATG CCCGGGATCG AGCCGCAGCT GGCGGAGCGC ACGATGGGAC TGCATGCTTC CCCGGTGGCG CAGGTCGTCT TCGATGGAAC GCGGGTGCCG GCGGAGCGGT TGATCGGCGG GGAGGGCAAG GGCTTCGGCA TCGCGATGTC CGCGCTGGAC TCTGGCCGGC TGGGGATCGC CGCCTGCGCG GTTGGCCTGG CGCAGGCGGC GCTGGACTAC GCGGTCGGCT ATGCCCGGGA GCGGCAGCAG TTCGGTCGGG CGATCGTTGA CTTCCAGGGG TTGGGATTCC TGCTCGCCGA TGCCGCCACC CAGATTTCGG CGGCCCGGGC GCTGATGCTG GCGGCGGCCC GGCTGCGAGA CGCCGGCCGG CCCTACTCGA TCGAGGCGGC GAAGGCGAAG CTGTTCGCCA CCGACGTGGC GATGCGGGTG ACCACCGACG CGGTGCAGGT GCTGGGTGGC GCTGGCTACG TCGCTGATCA CCCGGTGGAG CGGTACATGC GGGAGGCGAA GGTACTCCAG ATTGTTGAGG GGACCAACCA GATCCAGCGC TTGGTGATCT CCCGCGCGCT GGCGAAGGGC TGA
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Protein sequence | MTVDRILPTD EAHDLLDLAT ELADRELAPK AADHEERAEF PREVLRTLGR SGLLGLPYAE EYGGAAQPYE VYLQVLEILA SRWLAVAEAI SVHTLSCFPL AEYGTAQQRK LLPDLIGGEL LGAYCLSEPQ GGSDAAHLTT RAVPEGEEYI VSGTKAWITH AHVADFYNIF CRTGGAGARG ISCLLADRNM PGIEPQLAER TMGLHASPVA QVVFDGTRVP AERLIGGEGK GFGIAMSALD SGRLGIAACA VGLAQAALDY AVGYARERQQ FGRAIVDFQG LGFLLADAAT QISAARALML AAARLRDAGR PYSIEAAKAK LFATDVAMRV TTDAVQVLGG AGYVADHPVE RYMREAKVLQ IVEGTNQIQR LVISRALAKG
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