| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2254 |
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| Symbol | |
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| ID | 5058717 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 2547142 |
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| End bp | 2548062 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 640474516 |
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| Product | diacylglycerol kinase, catalytic region |
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| Protein accession | YP_001159082 |
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| Protein GI | 145594785 |
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| COG category | [I] Lipid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1597] Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase |
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| TIGRFAM ID | [TIGR00147] lipid kinase, YegS/Rv2252/BmrU family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.278612 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.816365 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGCAG TCGATTTTAC CGGTTCCGCT CGTCCGGTCG CCGTCCTGGC CAACCCGAGT
GCCGGCCGTG GGCGCCATCG TGGACTGCTG CCCACGGTGG TGCACCGGCT GGCGGCCGGC
GGTCACCCGG TACGGGTGCT TGACGCGCGG ACTCCGGCAC AGGCCCGGGC AGTCTGTCGT
GCGGCAGTGG ACGACGGCGC GGCAGCGCTG GTCGCGGTCG GCGGTGACGG CACCGTGCAC
CTGGCGCTAC AGGCGGTGGC GGGTACTCCA GTGCCGTTCG CGGTGGTGCC GGCGGGGACC
GGCAACGACT TCGCCGGTGA CACCGGCTTC CCGGCCGACC CCCTCGCCGC GGCCGACGCG
ATCGCCGCGG CGCTGCGGCA CGGCCGCTCC CACCCGATCG ACCTGGCCCG GGCCACCGCG
GCGGACGGCA CACAGCGGTG GTACGGGGCG GTGCTCGCGG CCGGCATTGA CGCGATCATC
AACGAGCGAG CCAACCGGAT GCGGTGGCCT CGTGGCCCCC GCCGCTACGA CCTGGCGATC
CTGGTGGAGT TGTCCCGGCT GCGGCCCCGC CGCTACACGT TGCGCCTGGA CGGGGTGACC
TACGAGCTGG ACGCCGTCCT GGTGGCGGTC GGCAACTGCG CCAGCTACGG CGGTGGCATG
CGGATCTGCC CCGCCGCCGA CCCGACCGAC GGGCTGCTCG ACGTGGTGGT GGGCGGGCGG
TTCAACCGGC GTACGCTGCT GCGGGTGAAG TCCCGCATCT ATCCGGGGAC GCACGTTGAC
CACCCGCTGG TGCGCAGCTT CCAGGCGCGG ACGGTGGAGG TGGCCGCCGC GGGCATCACC
AGTTACGCCG ACGGGGAGCG GGTGGCCGAA CTACCGGTGA CGATCACCGC GGCCCCGGCA
GCGGTGCGGC TGCTGCGCTG A
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| Protein sequence | MTAVDFTGSA RPVAVLANPS AGRGRHRGLL PTVVHRLAAG GHPVRVLDAR TPAQARAVCR
AAVDDGAAAL VAVGGDGTVH LALQAVAGTP VPFAVVPAGT GNDFAGDTGF PADPLAAADA
IAAALRHGRS HPIDLARATA ADGTQRWYGA VLAAGIDAII NERANRMRWP RGPRRYDLAI
LVELSRLRPR RYTLRLDGVT YELDAVLVAV GNCASYGGGM RICPAADPTD GLLDVVVGGR
FNRRTLLRVK SRIYPGTHVD HPLVRSFQAR TVEVAAAGIT SYADGERVAE LPVTITAAPA
AVRLLR
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