Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_2236 |
Symbol | |
ID | 5058699 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 2529523 |
End bp | 2530491 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640474498 |
Product | hypothetical protein |
Protein accession | YP_001159064 |
Protein GI | 145594767 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2887] RecB family exonuclease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.636003 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCCGCA GACGGCGCAG GTCACGCTGT CACCCCGGTG CCCTACCCTT TCCGGTCATG ACAGCGGATC CGGTGACAGC CCAGCAGCTC TCGCCCGGGG CGGAGGTGCC GGCCACGGTA CGGGCCTCGC TGTCCCCCTC GCGGGCGGCC GACTTCAAGA CCTGCCCGTT GCTCTACCGG TTCCGCAGCA TCGACCGGCT GCCCGAGCAG CCCACCGTGG AGCAGGCCCG GGGCACCCTG GTCCACGCCG TACTGGAACG GCTGTTCGAC CTGTCCCCCG CTGGCCGCAC CCCGAGGGCC GCCAGCGACC TGGTGGCTCC GCAGTGGGAG CGGCTGGTCG CCGAGCAGCC GGAACTGGCG GCCCTGTTCA CCGACGACGG CGAGGCTCGG TCGGCGTTCC TGCGTTCGGC CGCGGGGCTG CTTCAGGGCT ACTTCACGGT GGAGGATCCG CGCCGCCTGG AGCCGGCCGA GCGGGAGAGT CTGATCTCCG CGGTGGTGGA CGAGGAGCTG CTGATCCGGG GCTACCTGGA CCGGCTGGAC GTGGCGCCGG ACGGCGCGCT GCGGGTGGTC GACTACAAGA CCGGCGGCGC ACCGCGGGAG GCGTTCGAGG CGCGGGCGTT GTTCCAGCTC AAGTTCTACG CCCTGGTGTT GTGGCGGACC CGCGGCGTGG TGCCGCGGGT ACTGCGGCTG CTCTACCTGA AAGACGCGGA GGTCTGCGAC TACACGCCCG ACGCCGACGA ATTGGTGCGC TTCGAGCGCA CGGTGGTGGC GCTGTGGCGG GCGATCGAGG CGGCCACCGC CGCCCAGGAC TTCCGCCCAC GGCCAAGCCG GCTCTGTGAC TGGTGCAGCC ACCAGCGGCT CTGTCCGAGT TTCGGGGGCA CTCCGCCGCC GTTCCCGGTC GGCCCGAACC CGGCCGATTC ACTCCGTGAC TCGCGGTCCC GGCCGGTGCG GCCGGGCACC GACGAGTGA
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Protein sequence | MPRRRRRSRC HPGALPFPVM TADPVTAQQL SPGAEVPATV RASLSPSRAA DFKTCPLLYR FRSIDRLPEQ PTVEQARGTL VHAVLERLFD LSPAGRTPRA ASDLVAPQWE RLVAEQPELA ALFTDDGEAR SAFLRSAAGL LQGYFTVEDP RRLEPAERES LISAVVDEEL LIRGYLDRLD VAPDGALRVV DYKTGGAPRE AFEARALFQL KFYALVLWRT RGVVPRVLRL LYLKDAEVCD YTPDADELVR FERTVVALWR AIEAATAAQD FRPRPSRLCD WCSHQRLCPS FGGTPPPFPV GPNPADSLRD SRSRPVRPGT DE
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