Gene Strop_2236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2236 
Symbol 
ID5058699 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2529523 
End bp2530491 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content72% 
IMG OID640474498 
Producthypothetical protein 
Protein accessionYP_001159064 
Protein GI145594767 
COG category[L] Replication, recombination and repair 
COG ID[COG2887] RecB family exonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.636003 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCGCA GACGGCGCAG GTCACGCTGT CACCCCGGTG CCCTACCCTT TCCGGTCATG 
ACAGCGGATC CGGTGACAGC CCAGCAGCTC TCGCCCGGGG CGGAGGTGCC GGCCACGGTA
CGGGCCTCGC TGTCCCCCTC GCGGGCGGCC GACTTCAAGA CCTGCCCGTT GCTCTACCGG
TTCCGCAGCA TCGACCGGCT GCCCGAGCAG CCCACCGTGG AGCAGGCCCG GGGCACCCTG
GTCCACGCCG TACTGGAACG GCTGTTCGAC CTGTCCCCCG CTGGCCGCAC CCCGAGGGCC
GCCAGCGACC TGGTGGCTCC GCAGTGGGAG CGGCTGGTCG CCGAGCAGCC GGAACTGGCG
GCCCTGTTCA CCGACGACGG CGAGGCTCGG TCGGCGTTCC TGCGTTCGGC CGCGGGGCTG
CTTCAGGGCT ACTTCACGGT GGAGGATCCG CGCCGCCTGG AGCCGGCCGA GCGGGAGAGT
CTGATCTCCG CGGTGGTGGA CGAGGAGCTG CTGATCCGGG GCTACCTGGA CCGGCTGGAC
GTGGCGCCGG ACGGCGCGCT GCGGGTGGTC GACTACAAGA CCGGCGGCGC ACCGCGGGAG
GCGTTCGAGG CGCGGGCGTT GTTCCAGCTC AAGTTCTACG CCCTGGTGTT GTGGCGGACC
CGCGGCGTGG TGCCGCGGGT ACTGCGGCTG CTCTACCTGA AAGACGCGGA GGTCTGCGAC
TACACGCCCG ACGCCGACGA ATTGGTGCGC TTCGAGCGCA CGGTGGTGGC GCTGTGGCGG
GCGATCGAGG CGGCCACCGC CGCCCAGGAC TTCCGCCCAC GGCCAAGCCG GCTCTGTGAC
TGGTGCAGCC ACCAGCGGCT CTGTCCGAGT TTCGGGGGCA CTCCGCCGCC GTTCCCGGTC
GGCCCGAACC CGGCCGATTC ACTCCGTGAC TCGCGGTCCC GGCCGGTGCG GCCGGGCACC
GACGAGTGA
 
Protein sequence
MPRRRRRSRC HPGALPFPVM TADPVTAQQL SPGAEVPATV RASLSPSRAA DFKTCPLLYR 
FRSIDRLPEQ PTVEQARGTL VHAVLERLFD LSPAGRTPRA ASDLVAPQWE RLVAEQPELA
ALFTDDGEAR SAFLRSAAGL LQGYFTVEDP RRLEPAERES LISAVVDEEL LIRGYLDRLD
VAPDGALRVV DYKTGGAPRE AFEARALFQL KFYALVLWRT RGVVPRVLRL LYLKDAEVCD
YTPDADELVR FERTVVALWR AIEAATAAQD FRPRPSRLCD WCSHQRLCPS FGGTPPPFPV
GPNPADSLRD SRSRPVRPGT DE