| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2217 |
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| Symbol | |
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| ID | 5058680 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 2509873 |
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| End bp | 2510484 |
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| Gene Length | 612 bp |
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| Protein Length | 203 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640474480 |
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| Product | dTDP-4-dehydrorhamnose 3,5-epimerase |
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| Protein accession | YP_001159046 |
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| Protein GI | 145594749 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes |
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| TIGRFAM ID | [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.416092 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGGTCG AGAAGCTCGC GGTCCAGGGT GCGTTCGTGT TTACTCCTGA GGTGTTCTCG
GACCACCGCG GACTGTTCGT GTCACCATTC CAGCGATTGT CGTTCACGGC GGCGAACGGA
GGCCCGATCC TGCCCGTCGC ACAGACCAAC CACAGCATGT CCCGGCGGGG TGTGGTTCGC
GGAGTCCACT ACACCAGCAC TCCGCCGGGT GTGGCGAAGT ACGTCTACTG TGCTGTCGGT
GAGGCGATCG ACATCATCGT TGACGTCCGA GTCGGTTCAC CGACATTCGG CACCTGGGAC
GCGGTGCAGA TGAACTCGCA GGAGTTCCGG GCGATGTACT TTCCGGTCGG GGTCGGGCAC
GCCTTCGTGT CACTCGCGGA CGGCACCGTC ATGTCCTACA TGCTCACGGG GTCGTACGTC
CCGGAGCACG AGCGGGTGGT CTCCGCCTTC GACCCCGCTC TGGGGCTGCC GATCCCCACG
GACCTGGAGA CAATCATCTC CGATCGGGAC CGGGTTGGTC CGAGCCTGGC CGAGACCGCC
GAGGCCGGTC TCCTTCCCGA CTACCAGCAG TGCCAGGTCC TGGAGCACCA GCTCTATCGG
GTGGCCCACT GA
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| Protein sequence | MKVEKLAVQG AFVFTPEVFS DHRGLFVSPF QRLSFTAANG GPILPVAQTN HSMSRRGVVR
GVHYTSTPPG VAKYVYCAVG EAIDIIVDVR VGSPTFGTWD AVQMNSQEFR AMYFPVGVGH
AFVSLADGTV MSYMLTGSYV PEHERVVSAF DPALGLPIPT DLETIISDRD RVGPSLAETA
EAGLLPDYQQ CQVLEHQLYR VAH
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