Gene Strop_2209 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2209 
Symbol 
ID5058672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2501752 
End bp2502072 
Gene Length321 bp 
Protein Length106 aa 
Translation table11 
GC content67% 
IMG OID640474472 
ProductRieske (2Fe-2S) domain-containing protein 
Protein accessionYP_001159038 
Protein GI145594741 
COG category[P] Inorganic ion transport and metabolism
[R] General function prediction only 
COG ID[COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.149896 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTTCG TCAAGGTGTG CCCGGTGACG GCGCTCCCGG CCGAGGGCGC GTTCAAGGTA 
CGGGTCGAGG GCCGAGCCGT GGCCGTGGTC CGTAGCAGAG GACAGGTGTA CGCGCTCGAC
GACCGGTGTT CCCATGCGGA GGTTTCGCTC TCCGAGGGAG AGGTGTACGA CGGCACGATC
GAGTGCTGGC TCCACGGCTC CTGCTTCGAT CTGCGCAACG GCGAGCCGAC CAACCCCCCA
GCTACCCGAC CGATCGACAC CTATCGGGTA CGGGTCGAGG ATGGGGACGT CTACATCGCC
GCCGGCGAAG CCAAGCCCTG A
 
Protein sequence
MDFVKVCPVT ALPAEGAFKV RVEGRAVAVV RSRGQVYALD DRCSHAEVSL SEGEVYDGTI 
ECWLHGSCFD LRNGEPTNPP ATRPIDTYRV RVEDGDVYIA AGEAKP