| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2172 |
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| Symbol | |
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| ID | 5058635 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 2460444 |
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| End bp | 2462018 |
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| Gene Length | 1575 bp |
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| Protein Length | 524 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640474435 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_001159001 |
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| Protein GI | 145594704 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.632286 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGTGCTG GGGCTGACAC CGCGACGGGC GAGAATCGCT CATGGACGCG GGCCCAGAAG
TGGACAATCG TCGCTGCTGG TCTTGGTGTC TTCATCACCT TGCACGACGT GCTGGTGGCG
AACGTGGCAC TACCCCGAAT TCAGGCCTTC TACGGCTTGG GGGAGTCCGG GCTGCAGTGG
ATCGTCGCCT CCTACAGCAT GGGAATGGCC ATCGCCATCA TGCCCGCCGC CACCGTGGCT
GACCGGTTCG GGCGACGGCG ACTGTACCTG AGCGCGGTTG TGGTCTTCAT CGTCGCCTCG
GTGATCTCTG GCGTAACCTC CACCTTCGCG GTCATGCTGG TGGCGCGGGG AGTGCAGGGA
GTGGCCTCCG CCGTCATCAC CGTCTCCGCA CTGGCCCTGG TCTCGGCGAC CTTTCCGCAC
AAACGGCAGC GCTTTTTCGC CCTCGGGCTC TTTGCGGCGG TCGCCGATGT TGGTCTGGCG
CTCGGCCCGC CACTCGGTGG AATTCTGACC GAGACCGCGA GCTGGCGATT GGTCTTCTTT
GTCAACGTTC CGGTCGCGGT GCTGGCGGTC GGGCTCACCC TTCGGTACGT GGCCGAGTCC
CGTGAGTCCA CCCGTCGTGT CGTCGACCTG CCTGGTCAGC TGCTGTTTGT GATCACAGTC
GGTGCCTTTA CCTTTACTGT TATCGATGGC CATGACCTGG GCTGGGGATC GCCGACAATA
CTTGCGACGT TCGTCGCCTT CGCCGTTGGT CTCGCTGCCT TCATTGTCCG TGAACTTCGC
AGCCGGTCAC CGATGATGGA TCTGCGGCTC TTCGCCAGCC GCGCCTACCG GCTGGGGAAC
ATGGCCATAT TTTTCGGTAT GTTCACGGTG TATGGCGCGT TGTTGATCGT CACCCAGTAC
TTTCAGAACG TCCGGCTCTA CTCCCCGATC GAGGCTGGTC TGCTCATCTT GCCGTCCTCC
CTCGCGTCGG TGGCGTTCTC CCCGGTGGCT GGCTTCATCG CTGCCCGCCG TGGTGCCCGC
CTGCCGGCCC TCGCCGGCCA GGTTCTGCTC GTCGTCGGAC TGGCCGTCAT GGTGGTCGGG
GTGGCGCACA GTGTCGTCGC CGTCGTGCTG GGTTTCCTGC TCCTGGGTGC CGGGCTCTCT
CTGATCATCC CGCCGGTGCA GGGGCTGGCG TTGAATTCGG TGCCGGTGGA GCGGGCGGGT
ATGGCCTCGG GCATCGTGGC CACCCAACGA GGTCTTGGAT CAACCGCCGG CTACGCGGTT
CTCGGAACGA TCGTCTCGGT GTGGGTCGGC ATCGCCTTGG ACGGCGACCT GTCCAGGACC
ATTCCCGACC GCGACGAGCG GGCTGCTGTT GTCGAGCAAA TCGTCGACGA CACCAACCCC
AACGCTTTTG AGGCGGTAGT CGGGCCTGGT CGACCAGTCG ACCATCCCGA GTCCGACCAA
GTGACGACGA TCCGAACGGT CGCAGACCGT ACATTTGTGC GGGGTATGCA GCTCAGCCTG
GGTTTCGCCG CCCTGGTGGC CCTGATCATC CTGGTGATCC TCATCCGGAG CTTTCGTGAC
TCCCAAGATC AGTAG
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| Protein sequence | MGAGADTATG ENRSWTRAQK WTIVAAGLGV FITLHDVLVA NVALPRIQAF YGLGESGLQW
IVASYSMGMA IAIMPAATVA DRFGRRRLYL SAVVVFIVAS VISGVTSTFA VMLVARGVQG
VASAVITVSA LALVSATFPH KRQRFFALGL FAAVADVGLA LGPPLGGILT ETASWRLVFF
VNVPVAVLAV GLTLRYVAES RESTRRVVDL PGQLLFVITV GAFTFTVIDG HDLGWGSPTI
LATFVAFAVG LAAFIVRELR SRSPMMDLRL FASRAYRLGN MAIFFGMFTV YGALLIVTQY
FQNVRLYSPI EAGLLILPSS LASVAFSPVA GFIAARRGAR LPALAGQVLL VVGLAVMVVG
VAHSVVAVVL GFLLLGAGLS LIIPPVQGLA LNSVPVERAG MASGIVATQR GLGSTAGYAV
LGTIVSVWVG IALDGDLSRT IPDRDERAAV VEQIVDDTNP NAFEAVVGPG RPVDHPESDQ
VTTIRTVADR TFVRGMQLSL GFAALVALII LVILIRSFRD SQDQ
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