Gene Strop_2165 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2165 
Symbol 
ID5058628 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2450735 
End bp2451442 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content73% 
IMG OID640474428 
Productphosphoglycerate mutase 
Protein accessionYP_001158994 
Protein GI145594697 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0406] Fructose-2,6-bisphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.00557331 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTCACCG TGGCGACCCT ACTGCTCCTG CGACATGGCC GGACGACCGC GAACGCGGCC 
GGAGGGCTGG CCGGTCGGCA GCCGGTCGAG CTGGACGAGA CCGGCCGTGA TCAGGCCGCC
GCGGTCGGCG AACGGCTCCG GCTGCTGTCC TGCGCGACCG TGGTGACCAG CCCGTTGGTC
CGTTGCCGGC AGACTCTGGA CCTGGCGCTG CCCGAGGCCG TGCCGGTGGT GGAGGAAGGG
CTGACCGAGT GCGGGTACGG CAGCTGGGAG GGCCAGCCGC TGAAACAGCT CGCGAAGGAG
CCGCTCTGGC CGGTCGTGCA GCAGCATCCC AGCGCGGCGG TCTTCCCGGG TGGGGAGGCG
ATGGCGACCA TGGCGGCCCG GGCGGTGGCC GCGGTGCGTA CCTGGGATGC TCGGGTGAAC
GAGGGACACG GGCCGGACGC GGTCTGGCTG GCCTGTACCC ATGGCGACGT GATCAAGGCG
ATCGTGGCGG ACGCGCTCGG CTTGCACCTG GACCTCTTCC AGCGCATTGT CGTGGATCCG
GCCTCGGTCA CGGTGATCCG CTACACCCCG CTGCGCCCGT TCCTGGTGCG GCTCAACGAC
ACCGGCGGCG ATCTCACGGC GCTGGTCCCG CCCCCGCCGA AGCGAGGTCG GCGGAGCGCC
GCCGATTCGG ATGCCGCGAT CGGTGGTGGC GCCGGGGCAG GGGCCTGA
 
Protein sequence
MVTVATLLLL RHGRTTANAA GGLAGRQPVE LDETGRDQAA AVGERLRLLS CATVVTSPLV 
RCRQTLDLAL PEAVPVVEEG LTECGYGSWE GQPLKQLAKE PLWPVVQQHP SAAVFPGGEA
MATMAARAVA AVRTWDARVN EGHGPDAVWL ACTHGDVIKA IVADALGLHL DLFQRIVVDP
ASVTVIRYTP LRPFLVRLND TGGDLTALVP PPPKRGRRSA ADSDAAIGGG AGAGA