Gene Strop_2164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_2164 
Symbol 
ID5058627 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2449823 
End bp2450659 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content66% 
IMG OID640474427 
Productundecaprenyl pyrophosphate phosphatase 
Protein accessionYP_001158993 
Protein GI145594696 
COG category[V] Defense mechanisms 
COG ID[COG1968] Uncharacterized bacitracin resistance protein 
TIGRFAM ID[TIGR00753] undecaprenyl-diphosphatase UppP 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0646427 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCTGGG TCGAGGCCAT TGTCCTGGGC ATCGTGCAGG GCCTTACCGA GTTCCTGCCG 
ATCAGCTCGT CGGGCCACCT GCGGATCACC TCAGCGATCT TCTTCGAACG GGACGCCGGA
GCATCGTTCA CCGCCGTCAC CCAGCTCGGG ACCGAGGCAG CGGTACTGCT CTACTTCGCC
AAGGACATCT GGCGAATCAC CCGTACCTGG GTCGTCGGAA TCTGGGATCG GTCGGTGCGT
AGCAGCCTCG ACTACCGGAT GGGCTGGTAC GTCATCGTCG GCTCGATTCC GATCGGCGTC
TTCGGCCTGC TGTTCAAGGA CCAGATCCGG GAGACCGCGC GGAACCTGTG GCTGGTCGCC
AGCACGTTGA TCCTGTTCGC CTTCGTGCTG GCGTTCGCCG AGTACTGGGG TCGGCAGACC
CGAACGCTGG AGAACTTCCG GATGCGGGAC GGCGTGGTGA TGGGTTTCGC GCAGGCGATG
GCGCTGATCC CGGGTGTGTC CCGTTCTGGG GGAACCCTCA CCGCCGGCCT GCTGCTCAAC
CTGACCCGGG CGACCGCGGC CCGATACTCG TTCCTGCTGG CTATCCCCGC GGTGGTCATG
TCGGGCATCG TCAGCCTCGG GGACGTCTTC GCGCCAGCTG CCCCGGGTAC CTCGGTGCCG
AGCGGGGCAC AGATGATCGT GGCCACCGCA CTCGCCTTCG CCGTCGGGTA CGCGGCCATC
GCCTGGTTGC TGCGCTACGT AGCGCACCAC ACCCTGTACA TCTTCGTCCT GTACCGGGTC
GCGTTGGGAA CGCTGGTGCT CGCCCTGTTG CTGACCGGCA CGATCAGCGC CACCTGA
 
Protein sequence
MTWVEAIVLG IVQGLTEFLP ISSSGHLRIT SAIFFERDAG ASFTAVTQLG TEAAVLLYFA 
KDIWRITRTW VVGIWDRSVR SSLDYRMGWY VIVGSIPIGV FGLLFKDQIR ETARNLWLVA
STLILFAFVL AFAEYWGRQT RTLENFRMRD GVVMGFAQAM ALIPGVSRSG GTLTAGLLLN
LTRATAARYS FLLAIPAVVM SGIVSLGDVF APAAPGTSVP SGAQMIVATA LAFAVGYAAI
AWLLRYVAHH TLYIFVLYRV ALGTLVLALL LTGTISAT