| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2132 |
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| Symbol | |
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| ID | 5058595 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 2409728 |
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| End bp | 2411887 |
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| Gene Length | 2160 bp |
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| Protein Length | 719 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640474395 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_001158961 |
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| Protein GI | 145594664 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00802467 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00453375 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGACAGAA CCGAGACAAC CTACGGGCCC CAGGCGGCCG CCCCGGCGAC GAGCGTCACT
TCGACGTCGC CGGCAGAGTC GGAGGCAGAG CCGACCTCCA CGCCGCGTCG GTCGGCCCGT
TGGGCCCGCC TCTGCCTCGG TGGGCTCCTG CTCGCCACCG CTTGGCTCTA CCTGTGGGGG
CTCGACGTCT CCGGTTGGGC GAACGCCTAC TACTCGGCGG CGGCGCAGGC CGGCGCAGAG
AACTGGACCG CCCTCTTCTA CGGCTCGTCG GATGCCGCCA ACTCCATCAC CGTTGACAAG
ACACCCGCCG CGCTGTGGCT GATGGCGCTC TCGGTGCGGC TGTTCGGCCT GAACAGCTGG
GCGGTGCTGC TGCCGCAGGC GCTGTGCGGG GTGGCCGCGG TCGCGGTGCT CTATGCCACG
GTACGGCGCT GGTATGGCCC GGCAGCAGGG TTGATCGCCG GCGCGGTCCT CGCCGTCACG
CCGGTGGCCA CGCTGATGTT CCGGTTCAAC AACCCGGACG CGCTGTTGGT GCTGCTTCTG
GTCGGCGCCG CCTACGCCAC CGTACGAGCG ATCGAGACGG CTGCCACCCG TTGGCTCGTA
CTCGCCGGGG TGCTGGTCGG GCTCGGCTTC CTCACGAAGA TGCTGCAGGC GTTCCTGGTG
GTACCAGTGC TCGCCGGCGT CTACCTGCTG GCCGCGCCGA CCGGGCTCGG CCGGCGGATT
CGTCAGACCC TGCTGGCCGG CCTCGCGGTC GTGCTGTCGG CGGGGTGGTG GGTGGCCATC
GTCGAATTGG TCCCTGCCAG CGCTCGCCCG TACGTCGGCG GCTCGCAGAC CAACAGTGTC
CTCGAGTTGA CCCTTGGCTA CAACGGTCTC GGCCGCATCA CCGGCCGCGA GGTGGGCAGC
GTGGGGCAGT CCGGTGGAGG GAGGTTCGGT GACGGGACCG GACTGCTGCG CATGTTCGAC
GACCGGGTCG GCGGGCAGAT CGCCTGGCTG TTGCCAGCCG CGCTGATTCT CCTTGTGGTC
GGCCTGCTGA TGGCCGGCCG GGCTCCGCGT ACCGACCGGA CCCGCGCCGG GCTGCTGCTC
TGGGGCGGCT GGCTGCTGGT TACCGGCGCG ATCTTCAGTT TCATGTCCGG GATCTTCCAC
GAGTACTACA CCGTGGCCCT GGCACCGGCG GTTGGTGCCC TGGTCGGGAT CGGTGTCACG
CTGCTGTGGC GGGTGCGAGC CGCTCCGCGC GGCGCTGTCT GGCGTCGGCT GCCGTACGCC
GCCACCGCGG TTCTGGCCGG GACGCTGGCT GTCACCGTGG GATGGTCCTG GCTCCTGCTG
GGCCGTAGCC CTGACTGGTA TCCGTGGTTG CGTACCACGA TCTTGGTGGG TGGCATCGTG
GCGGCGGCGT TGCTGGTGCT TTCTCCTCGG CTACCCCGGT CAGTTGGGGC GGCGGGTGTC
GCGCTGGGCG CCGCGGCGGC CCTCGCCGGG CCGGTGGCGT ACTCGGTGCA CGCCTCCGCT
ACGGCGCACA ACGGTGGGGT TCCCACCGCG GGCCCGGCGT TGGCTGGCGA TGTCGGCACC
AGGTCTGGTG GCGCCGGGGA CGGGCCCGGC GCCCCCGGTG GCGGTCAGCC TCCCGGTGCC
GGGCAGTTGC CGCAGAGGCC GGATCGGCAA CCCGGCACGG CGGCCGACGG CCGCCAGCAG
GGTGGGTCGG GTCAGCCGGG TGGGTCGGGT CAGCCGGGTG GGTCGGGTCA GCCGGGTGGG
TCGGGTCAGC TCGGCCAGCC GGTCGGCGAC GGCGGGCGCG GCGACGGCGG GCTGTTGGGT
GCCCGCGTTC CCAGTGCGCA ACTGCGCGAG CTACTCGAGC TCGACAGCGA CAGGTACACC
TGGGTGGCGG CCACGGTGGG TGCGAACAAC GCCGCCGGCT ACCAGCTGGC CACCGGTGAT
CCGGTGATGC CCGTGGGCGG GTTCAACGGC ACCGACCCCT CCCCGACCGT CGCCGAGTTC
CAGCGCTATG TCGCTGACGG AAGGATCCAC TGGTTCATCG GTGGAGGTGG CTTCCGGGGT
GCCAACGGTG GCAGCTCCGC CTCCTCCGAG ATCGCCGCCT GGGTGGCGCA GACGTTCGAG
GCGCGAACCG TGGACGGAGT CACGATCTAT GACCTGAGCA ACGGGGGGGC CAACGCATGA
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| Protein sequence | MDRTETTYGP QAAAPATSVT STSPAESEAE PTSTPRRSAR WARLCLGGLL LATAWLYLWG
LDVSGWANAY YSAAAQAGAE NWTALFYGSS DAANSITVDK TPAALWLMAL SVRLFGLNSW
AVLLPQALCG VAAVAVLYAT VRRWYGPAAG LIAGAVLAVT PVATLMFRFN NPDALLVLLL
VGAAYATVRA IETAATRWLV LAGVLVGLGF LTKMLQAFLV VPVLAGVYLL AAPTGLGRRI
RQTLLAGLAV VLSAGWWVAI VELVPASARP YVGGSQTNSV LELTLGYNGL GRITGREVGS
VGQSGGGRFG DGTGLLRMFD DRVGGQIAWL LPAALILLVV GLLMAGRAPR TDRTRAGLLL
WGGWLLVTGA IFSFMSGIFH EYYTVALAPA VGALVGIGVT LLWRVRAAPR GAVWRRLPYA
ATAVLAGTLA VTVGWSWLLL GRSPDWYPWL RTTILVGGIV AAALLVLSPR LPRSVGAAGV
ALGAAAALAG PVAYSVHASA TAHNGGVPTA GPALAGDVGT RSGGAGDGPG APGGGQPPGA
GQLPQRPDRQ PGTAADGRQQ GGSGQPGGSG QPGGSGQPGG SGQLGQPVGD GGRGDGGLLG
ARVPSAQLRE LLELDSDRYT WVAATVGANN AAGYQLATGD PVMPVGGFNG TDPSPTVAEF
QRYVADGRIH WFIGGGGFRG ANGGSSASSE IAAWVAQTFE ARTVDGVTIY DLSNGGANA
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