| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_2117 |
|---|
| Symbol | |
|---|
| ID | 5058580 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 2394125 |
|---|
| End bp | 2394709 |
|---|
| Gene Length | 585 bp |
|---|
| Protein Length | 194 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640474380 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001158946 |
|---|
| Protein GI | 145594649 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2119] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0176125 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGGGTT TCCTCGTCGC GCTGGGAGTG AGCTTCGGCG TCATCTTCGT CGCCGAGTTG
GGGGACAAGT CCCAGCTGAT GGCCTTGACC TTTGCCACCC GACTTCGACC GTTGCCGGTG
CTGATCGGCA TCACCGTGGC TACGGCCGTC GTACATCTGG CCTCGGTGGC GATCGGCTAC
GGGCTCGGTG CGGCGTTGCC CACCGGATGG ATCGCGCTGC TCGCCGGCGT GGCGTTTCTC
GGGTTTGGCG CCTGGGCGCT TCGCGGTGAC CGCCTTACCG AGCAGGAGCG CCGTAAGGCG
GACAGGTCGG GCCGCCCGGC GGTGGTGGTC GGCGTCGCGT TCCTCCTCGC CGAGCTGGGC
GACAAGACCA TGCTGGCGAC CATCACCCTG GCGACCCAGT ACGGCTGGTT CGGTACCTGG
GTCGGATCCA CGCTCGGCAT GGTCGCCGCG GATGCCCTGG CGATTGTGGT GGGGCGGGTG
CTCGGCCGCA GGTTGCCTGA GCGGACCGTG CGCTTCGGTG CGGCGTTGCT CTTCGCCGGG
TGTGGCCTCT GGCTGATCCT GGATGCGGTC GGACAGCTCG GCTGA
|
|---|
| Protein sequence | MEGFLVALGV SFGVIFVAEL GDKSQLMALT FATRLRPLPV LIGITVATAV VHLASVAIGY
GLGAALPTGW IALLAGVAFL GFGAWALRGD RLTEQERRKA DRSGRPAVVV GVAFLLAELG
DKTMLATITL ATQYGWFGTW VGSTLGMVAA DALAIVVGRV LGRRLPERTV RFGAALLFAG
CGLWLILDAV GQLG
|
|---|
| |