Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_2023 |
Symbol | |
ID | 5058486 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 2294086 |
End bp | 2295942 |
Gene Length | 1857 bp |
Protein Length | 618 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640474288 |
Product | hypothetical protein |
Protein accession | YP_001158854 |
Protein GI | 145594557 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.434949 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.479969 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGGGCT GCACTAGCCA TTCCGCCATC GAGGCGCAGT TCGGCCTGGC CCCCGGCTCG GTCTCCATCG CCGCGGCGAC CTGGACGAAG GCGCTGAAGC GCTCGGGGCT CACCCCGTAC CGGCTGGACG CGCAGCGCGG TACCCGTACT CGCGGCCGTG GCGGGCGGGG CATCGCCGCG CCTGCCACCG GTCTCCCCGA CCGGCTCTCC GGATTTCTCG CCGCACCACC CGAGCTCAAC GGCCTCGACG AGACGGAGCT CCGCGGCTGG TGCGTTGACA TCGTTCGGCT CGCCCGACGC AACGGCTACC TTGCCAGCAC CGCCGACGCG ATCGCCGTCT ACGAGACCTC CATCCTCCTC GCCGGCCTAC GCAGTCGGAC CCGTCCCACC CCGTACGACT TTGCCGACGC CGCGGTCACC TGCATCGAGA AGGACGTCGT CCCCGGCCGG CGGGACGTCC GCCGGCTCTG CGAGATCCTG CTCGGCGGCG ACCGAGTCGG CCAGGTCGGC TACGAGGCCC TCCCACCGCT GGCCCGCGAT GTCCTCGAAC GTCTCCGCCC GCTCGGTTTG GACCTGGAGA AGCGCACCAT CCAGCGGGCC CTGCTCGACC TGCACGCCGA CTCGCGACTG GCGCCCTGCT CCGATCTGCT CTGGATGCTG CGGTACCTGC TCCCGCACGA TGCCCTTCGT CCGATCATGG GGGAGCGGCG GCTGGGTCAC CGCTCCATCC AGGAGAGTTG GGATGTCGCT CTCGGCCGTA ACCAACGGGC CCTGATCGAG CTGGGCTACG AGGGCGTCAC CGTGGAGCAG GTGCTGGAGC AGCGGCTGCG TCGCGTGGTA CGCGGGGCGC AGGCGACTGC TGCCGGAGCT CTGGCGGCGA TCGAGGACGC CATCCGACTG CTCGATAGTC CTCGTCTGGT CGACGAACTC GGCGCTCGGG CCGTGGAGCT ACTCGCCGCC GAACGCACTG TCGACGACGC CCCGAACGTG CTGCGCCGCA TCCGCCGGCT ACTGGCCCAC TACCGCGCCA CTGCGACGGC TCTACCGGCC TGGTGCGAGG CGTTCGTGGC CGCCGGCTAC ACGCACTACT GCACCCTGCT GCCGAGCGCG TTCGTCGACG AGCAGGCCGG GGTCCGGCAG GTCGGTGCCA TGCTCGGCTT CCTGTTCAGC ATGGAGAACC TGGCGCTGTC CCTCGGCTGC GACCGCACGC AGCTCGAACT CGCCGTTGCG CAGGCACACC CGGAGGCACC CGCAAAGGTG GCTCTGCACT GGTCGGCCCG ACACCAGCTG GGCCTGCTGC CCCTCGCCGA ACTGCGCGCC CGCTGCGCCG ATCTGCTGGC CAACCCGCTG GTGGTGCCGA TCTTTCCGCG GTACCTCTCC GGCTTCGTGC AGGCCCTCGA CTCGGTACCC GGGCTGGCGT CGTTTGTGGT CGAGCTGATG TCGACCGCGT TCGCTCAGCT GCCCGACCCG ATCCTGCTGC CCTGGCTGCC CACTCTCATC AATACGCTGC GCGAGCACGG CTCGGAGCTG GTACCACTGC TGATCCGCGA GGCGGCAAAC ACCTTCCCCG GCACCCTGCC CGCGCTGGAC ACCTGGGTGC CGCCCTGGGC CACAACCACC CCGGCACCGG CCCCGCCGGT CGTGCCGGCG GGGCCGGTTG TCGGCCTGCT GACCGACCAT CCCGATTCCG TCGATGCGAT CGCCGCACTG CTCGGCTGCT CCAACCCATG GCGACGACAC GACCAACGTG CCGGCACCGA GGTAGCGGCA CTTCTCACCC AACACCCGGA CAGCGCGGTA GCCGTGGCCG ACCTCCTGTC GGCACGGTCG CGAATCGCCC CATCGAGGCA GGACTAG
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Protein sequence | MRGCTSHSAI EAQFGLAPGS VSIAAATWTK ALKRSGLTPY RLDAQRGTRT RGRGGRGIAA PATGLPDRLS GFLAAPPELN GLDETELRGW CVDIVRLARR NGYLASTADA IAVYETSILL AGLRSRTRPT PYDFADAAVT CIEKDVVPGR RDVRRLCEIL LGGDRVGQVG YEALPPLARD VLERLRPLGL DLEKRTIQRA LLDLHADSRL APCSDLLWML RYLLPHDALR PIMGERRLGH RSIQESWDVA LGRNQRALIE LGYEGVTVEQ VLEQRLRRVV RGAQATAAGA LAAIEDAIRL LDSPRLVDEL GARAVELLAA ERTVDDAPNV LRRIRRLLAH YRATATALPA WCEAFVAAGY THYCTLLPSA FVDEQAGVRQ VGAMLGFLFS MENLALSLGC DRTQLELAVA QAHPEAPAKV ALHWSARHQL GLLPLAELRA RCADLLANPL VVPIFPRYLS GFVQALDSVP GLASFVVELM STAFAQLPDP ILLPWLPTLI NTLREHGSEL VPLLIREAAN TFPGTLPALD TWVPPWATTT PAPAPPVVPA GPVVGLLTDH PDSVDAIAAL LGCSNPWRRH DQRAGTEVAA LLTQHPDSAV AVADLLSARS RIAPSRQD
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