Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_1989 |
Symbol | |
ID | 5058452 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 2255499 |
End bp | 2256254 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640474255 |
Product | hypothetical protein |
Protein accession | YP_001158821 |
Protein GI | 145594524 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.476491 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.123157 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCTATC ACGTTCGTGT CGATCCGCAC GACAGTCAAG CCGGGACACG CCTTGCGGCT GCGCTGCAAG GCGTCGGCCT GGCCACTTTC GAGGGCGTCA CGGACCGGGC GTCGCTGCTG CGCCTGGCAG GGCAGGTGAT GCACGTCTGG CACCACCGCG ACAGCGAGCC GGACGGTGTC ACCGCGATCG GTGATCGTGG CGAGCTGGCT CGCCGACCCG GATCGGCCGG CTTCGGCCGC GACGAGCTGA CCGTGCACAC CGAGTCCTCG GCCGAGGACC AGCCTCCCCG GCTGATGCTG TTGTTCTGTG CCCGTGGCGC TGCCTCCGGC GGTGAGTGCC GTCTGGTCGA CGGTGCCCGG CTGCACCACG AGATGGCGCT GCGCGACCCT GAACTGCTCA ATGCGCTGTG CGCTCCGCGC AGTGTGCTCT TCGGCGGCGC CGCCGGCCAC CTCGGTTCGG TGTTCACCAA GCACGACGGC CGGACCGTCG TCCGGTTCCG GCTCGACGAC CTGGCCAGGT TCTCCCCGCA GATCACCCGG CGGCTGGCCT CGCTACGGGC GATCTTGCAT GACCTGGAGA CACCGGTGCC ACTCAGGCCC GGCCACGGCT ACCTGCTGTG CAACACTCGC TGGCTGCACG GCCGCGCCGC CTTCACGGGA GAACGTCTCA TGTACCGGCT GCTGGGCAAC CCGCTGCCCA CGGTCGAGAT CCCTGCGGGC TTCGCGACCT CGCTGGCCGA GCCCGCGACG GTCTGA
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Protein sequence | MIYHVRVDPH DSQAGTRLAA ALQGVGLATF EGVTDRASLL RLAGQVMHVW HHRDSEPDGV TAIGDRGELA RRPGSAGFGR DELTVHTESS AEDQPPRLML LFCARGAASG GECRLVDGAR LHHEMALRDP ELLNALCAPR SVLFGGAAGH LGSVFTKHDG RTVVRFRLDD LARFSPQITR RLASLRAILH DLETPVPLRP GHGYLLCNTR WLHGRAAFTG ERLMYRLLGN PLPTVEIPAG FATSLAEPAT V
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