Gene Strop_1989 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1989 
Symbol 
ID5058452 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2255499 
End bp2256254 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content70% 
IMG OID640474255 
Producthypothetical protein 
Protein accessionYP_001158821 
Protein GI145594524 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.476491 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.123157 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTATC ACGTTCGTGT CGATCCGCAC GACAGTCAAG CCGGGACACG CCTTGCGGCT 
GCGCTGCAAG GCGTCGGCCT GGCCACTTTC GAGGGCGTCA CGGACCGGGC GTCGCTGCTG
CGCCTGGCAG GGCAGGTGAT GCACGTCTGG CACCACCGCG ACAGCGAGCC GGACGGTGTC
ACCGCGATCG GTGATCGTGG CGAGCTGGCT CGCCGACCCG GATCGGCCGG CTTCGGCCGC
GACGAGCTGA CCGTGCACAC CGAGTCCTCG GCCGAGGACC AGCCTCCCCG GCTGATGCTG
TTGTTCTGTG CCCGTGGCGC TGCCTCCGGC GGTGAGTGCC GTCTGGTCGA CGGTGCCCGG
CTGCACCACG AGATGGCGCT GCGCGACCCT GAACTGCTCA ATGCGCTGTG CGCTCCGCGC
AGTGTGCTCT TCGGCGGCGC CGCCGGCCAC CTCGGTTCGG TGTTCACCAA GCACGACGGC
CGGACCGTCG TCCGGTTCCG GCTCGACGAC CTGGCCAGGT TCTCCCCGCA GATCACCCGG
CGGCTGGCCT CGCTACGGGC GATCTTGCAT GACCTGGAGA CACCGGTGCC ACTCAGGCCC
GGCCACGGCT ACCTGCTGTG CAACACTCGC TGGCTGCACG GCCGCGCCGC CTTCACGGGA
GAACGTCTCA TGTACCGGCT GCTGGGCAAC CCGCTGCCCA CGGTCGAGAT CCCTGCGGGC
TTCGCGACCT CGCTGGCCGA GCCCGCGACG GTCTGA
 
Protein sequence
MIYHVRVDPH DSQAGTRLAA ALQGVGLATF EGVTDRASLL RLAGQVMHVW HHRDSEPDGV 
TAIGDRGELA RRPGSAGFGR DELTVHTESS AEDQPPRLML LFCARGAASG GECRLVDGAR
LHHEMALRDP ELLNALCAPR SVLFGGAAGH LGSVFTKHDG RTVVRFRLDD LARFSPQITR
RLASLRAILH DLETPVPLRP GHGYLLCNTR WLHGRAAFTG ERLMYRLLGN PLPTVEIPAG
FATSLAEPAT V