Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_1887 |
Symbol | pheT |
ID | 5058346 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 2153196 |
End bp | 2155781 |
Gene Length | 2586 bp |
Protein Length | 861 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640474157 |
Product | phenylalanyl-tRNA synthetase subunit beta |
Protein accession | YP_001158727 |
Protein GI | 145594430 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0072] Phenylalanyl-tRNA synthetase beta subunit |
TIGRFAM ID | [TIGR00472] phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.447501 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.335084 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGAGTTT CTGTCAGTTG GCTGCGTGAG TACGTTGACC TGCCGGCGCA TCTGACCCCG GCCGACCTCG AGCAGTCCCT GGTCGGTCTT GGTCTCGAGG TGGAGTCCAT CGTGGACCTG GCCGGTACGG TCACCGGGCC GCTGGTCGTC GGCGAGGTGC GGGAGATTGA GGAGCTGACC GGCTTCAAGA AGCCGATTCG CTTCTGTCGG GTGGACGTGG GTGACGCCAA CGGCACCGGC GAGTTGCAGG AGATCGTCTG CGGGGCGCGC AACTTCGCGG TCGGTGACCG GGTGGTGGTG ATCCTCCCCG GCGGGGTGCT GCCCGGTAAC TTCGCGATCG GGGCGCGCCG GACGTACGGG CGTAACTCCA GGGGCATGAT CTGCTCGGCG AAGGAACTGG GCCTGGGCGA CGACCATGCC GGCATCATTG TGCTGCCGGG CTCCAGCCCC GCCAAGCCGG GCGACGACGC CCGCCCCGTG GTTGGCCTCG ACGACGTGGT GGTCGAGGTG GAGCTGACCC CGGACCGGGG TTACCAGATG TCGGTGCGGG GGATCGCCCG GGAGCTGTCG CACGCGTTCG GGGTGCCGTT TCGGGATCCG GGGCTCGCGT CCGCCCCGGC CGGGACCGAA GCGCCCGCGT ACCCGGTGGA GGTGCGGGAT CCCGTCGGCT GTGACCGGTT CGCGGCGCGG ATGGTACGTG GCGTCAACCC GGCCGCGCCG TCGCCGGCCT GGATGGTCCA ACGGCTCACC ACCGCCGGCA TTCGCAGCCT CTCGCTGCCG GTCGATATCA CCAACTACGT GATGCTCGAG CTGGGCCAGC CGATGCACGC CTTCGACGCG GACCGGATCA CCGGCTCGCT GGTGGTCCGC CGGGCCGTGG CGGGGGAGCA GTTGACCACC CTGGACGGGG TGGTGCGCAC GCTCGTCGCC GAGGACATGG TGATCTCTGA TGCGGGGCTG CCGAATCCGA ACCCGGCTGC GGGCGCGGAC GCCGGTGCCC CGATTTCGCT CGCTGCCGTC ATGGGTGGGG AGAGCAGCGA GGTGGTCGCG GAGACCAGCA ACGTGTTGTT CGAGGCGGCC CACTGGGATC CGGTGATGGT GGGGCGCACC GCCCGCCGGC ACCGGCTGTT CAGCGCGGCA GCCAAGCGGT GGGAGCGGGG CGTCGACCCA GCCCTGCCGT TGGTTGCCAT CGACCGGGCG GTGCGGCTGC TGGTGGAGCA TGGCGGCGGC GCGACCGGTG CGGAGATCCT CGATATCGAT CATCGAACGT CGCCGGTACC GGTGGTCATG CCGGCGGACC TGCCGTCTCG ACGGGTCGGG GTGGCCTACC CGGCGGACCG GGTGGCTGCC CTGCTCACCG AGATCGGCTG CACGGTTGCC GCCGGCCCGG ATCAGCTCAC CGCGGATCCG GGTGAGGTGG GTGTCGCCGC TGGTGGCGCG GTCTCGTTCG TGGTTACCCC GCCGACCTGG CGACCCGACC TGACCGACCC GGCCGACCTG GTCGAGGAGG TGGTCCGTCT CGACGGCTAC GACCGGGTGC CGGCGGTGCT GCCGGTGGCC CCCGCCGGCC GGGGCTTGAC CTGGCAGCAG CGGCGCCGGC GGGCGGTGGC CAGGATGCTC GCCGACCGGG GGTACGTGGA GGTGCTCTGC TCGCCGTTCG TGGCGGTCGA GCTGGCCGAC CAGCTGGGCC TGCCGGCCGG CGATGCGCGG CGGCGGGCGG TGCGGCTGGC CAACCCGCTG TCGGAGGAGG AGCCGGCGCT GCGGACGACG CTGCTTGGTC CGCTGCTCGG TGTGCTCCGG CGGAACCTGG GCCGGGGCCA GCGGGACCTC GCGCTGTACG AGATCGGGAC GGTCTTCCAC CCGCGGACCG AGGCCGGCAC TCCGCCGCGG ATGGGGGTGG AGCACCGGCC GTCGGACGCG GAGCTCGCCG CCGCCGATGC GGTGCTGCCG GAGCAGCCCC AGCACGTCGC CGTGGTGCTC GCCGGTGAGG TCGAGCCGGG TGGCTGGTGG GGCGAGGGGC GCCCGGCCGG CTGGGCGGAC GCGGTCGAGG CGGCCCGGAC GGTGCTCGCC GCCGCCGGTA TTCCCGAGGA CCGGGTGACC GTGCGGGCCG TGGAGCACGC CCCCTGGCAC CCCGGGCGCT GTGCGCAGCT GGTGGTGGAC GGCGTGACTG TCGGGTACGC GGGGGAGCTG CATCCGGCGG TGATCGCCGG GTTGGAGTTG CCCCGCCGTA CCGCGGCGAT GGAGCTGGAC CTGGACGCGG TCCCGGCGGC CCCGGTGCGG CAGGCCCCGG TGATCTCGTC CTTCCCGCCC GCCCTGATCG ATGTGGCGCT GGTGGTCGAT GTCGACGTGC CGGTCGCCCA GGTGCAGGGG GCGCTGGTGG AGGGGGCCGG CGAGCTGTTG GAGTCGGTCC GGCTCTTCGA CGTGTACGCC GGTGAGCAGC TCGGCGCGGG TCGTCGGTCG TTGGCGTACA AGCTGACCTT CCGTGCGCCG GATCGGACGC TGACGGTGGA GGAGGCGGTC GCGGCGCGGG ACGCGGCGGT TGCCGCTGTC GCGGAGCGTT TCGGCGCAAC CCTCCGGGGC GTGTGA
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Protein sequence | MRVSVSWLRE YVDLPAHLTP ADLEQSLVGL GLEVESIVDL AGTVTGPLVV GEVREIEELT GFKKPIRFCR VDVGDANGTG ELQEIVCGAR NFAVGDRVVV ILPGGVLPGN FAIGARRTYG RNSRGMICSA KELGLGDDHA GIIVLPGSSP AKPGDDARPV VGLDDVVVEV ELTPDRGYQM SVRGIARELS HAFGVPFRDP GLASAPAGTE APAYPVEVRD PVGCDRFAAR MVRGVNPAAP SPAWMVQRLT TAGIRSLSLP VDITNYVMLE LGQPMHAFDA DRITGSLVVR RAVAGEQLTT LDGVVRTLVA EDMVISDAGL PNPNPAAGAD AGAPISLAAV MGGESSEVVA ETSNVLFEAA HWDPVMVGRT ARRHRLFSAA AKRWERGVDP ALPLVAIDRA VRLLVEHGGG ATGAEILDID HRTSPVPVVM PADLPSRRVG VAYPADRVAA LLTEIGCTVA AGPDQLTADP GEVGVAAGGA VSFVVTPPTW RPDLTDPADL VEEVVRLDGY DRVPAVLPVA PAGRGLTWQQ RRRRAVARML ADRGYVEVLC SPFVAVELAD QLGLPAGDAR RRAVRLANPL SEEEPALRTT LLGPLLGVLR RNLGRGQRDL ALYEIGTVFH PRTEAGTPPR MGVEHRPSDA ELAAADAVLP EQPQHVAVVL AGEVEPGGWW GEGRPAGWAD AVEAARTVLA AAGIPEDRVT VRAVEHAPWH PGRCAQLVVD GVTVGYAGEL HPAVIAGLEL PRRTAAMELD LDAVPAAPVR QAPVISSFPP ALIDVALVVD VDVPVAQVQG ALVEGAGELL ESVRLFDVYA GEQLGAGRRS LAYKLTFRAP DRTLTVEEAV AARDAAVAAV AERFGATLRG V
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