Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_1885 |
Symbol | |
ID | 5058344 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 2150981 |
End bp | 2151925 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640474155 |
Product | tRNA/rRNA methyltransferase (SpoU) |
Protein accession | YP_001158725 |
Protein GI | 145594428 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0566] rRNA methylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.114831 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGTCAC GACCGCACGG GAGGCGCCTC GACACCGTTT CCGGACCCCT CACCCCCCGC ACCCCACGGA TCGTGGCGGC CCGTCGGCTG CACCGCCGCC GGGACCGCGA GGCCACTGGT CGGTTCCTGG CCGAGGGCCC GCAGGCGGTC CGCGAGGCCT TGGCCCGACC GGGCACGGTC CTGGAACTCT TTGGTACGCC GGCAGCCCTG GATCGGTACC GGGACCTGGC CGCTCAGGCT GCCGCCGCTG ACCTACCCGT CTCCGAGGCC ACCGACGCGG CGCTCGCCGG GCTCGCCGAG ACCGTCGCCC CGCAGGGCCT CATCGCCGTC TGCCAACACC TCGACCTACC GCTGGCCACC GCCCTCGCGC GAGCGCCACG GCTGGTCACA GTCCTCGCCG ACATCCGTGA TCCGGGCAAC GCCGGTACGG TCCTGCGTAC CGCCGACGCG GCCGGAGCCC AAGCAGTGGT CTTCGCCGGT ACGGCCGTCG ACCCCTACAA CGGCAAGGTG GTGCGGGCGT CGGCGGGCAG CCTGTTCCAC GTGGACGTGG TGCGTGCGCC CGATCCGCTT CAGGTCATCG CCGACCTACG GACTGCCGGG CTCGCCGTGT TGGCTACCAC CGGATACGGC GCGGACGACC TGGACGACCT GGCCGATGCC GGCCGGTTGG CCGCCCCCAC CGCCTGGGTG TTTGGCTCCG AGGCGCACGG CTTGCCAGTC GAGCTGACCG CGGCCGCCGA GGCCCGGGTC CGGGTACCGC TGCATGGGCG GGCCGAGAGC CTTAACCTGG CTGCCGCAGC GGCGGTGTGC CTGTACGCTT CAGCGAGAGC GCAGCGTCGG CCGTCGCCCC CGCACGCGGT TGCGGCGGTA GCCGCGGTCG AGGACGTAGC CGCGGTTGAG GACGTAGCCG CGATCGAGAC AGCAAAGGAG AGCGGCCGCC CGTGA
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Protein sequence | MQSRPHGRRL DTVSGPLTPR TPRIVAARRL HRRRDREATG RFLAEGPQAV REALARPGTV LELFGTPAAL DRYRDLAAQA AAADLPVSEA TDAALAGLAE TVAPQGLIAV CQHLDLPLAT ALARAPRLVT VLADIRDPGN AGTVLRTADA AGAQAVVFAG TAVDPYNGKV VRASAGSLFH VDVVRAPDPL QVIADLRTAG LAVLATTGYG ADDLDDLADA GRLAAPTAWV FGSEAHGLPV ELTAAAEARV RVPLHGRAES LNLAAAAAVC LYASARAQRR PSPPHAVAAV AAVEDVAAVE DVAAIETAKE SGRP
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