Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_1882 |
Symbol | |
ID | 5058341 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 2149696 |
End bp | 2150310 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640474152 |
Product | translation initiation factor IF-3 |
Protein accession | YP_001158722 |
Protein GI | 145594425 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0290] Translation initiation factor 3 (IF-3) |
TIGRFAM ID | [TIGR00168] translation initiation factor IF-3 |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.0284235 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACGAGC AGATCCGGGC ACGTGAGGTC CGACTGGTCG GCCCCGAGGG TGAGCAGGTG GGCATCGTCC CGCTGGAGCG CGCCCTTCAG CTGGCCGCGG ACGTCGACCT GGACCTGGTC GAGGTTGCGC CAATGGCGCG CCCGCCGGTG TGCAAGCTCA TGGACTTCGG CAAGTTCAAG TATGAGAGCG CACTGAAGGC GCGCGAAGCG CGGCGTAATC AGCAGCAGAC CGTCATCAAG GAAATGAAGC TTCGGCCGAA GATCGATCCG CATGACTACG AGACCAAGAA GGGTCACGTG GTGCGGTTCC TCAAGGCCGG CGACAAGGTC AAGGTGACGA TCATGTTCCG GGGTCGTGAG CAGAGCCGCC CGGAGCTGGG CTACCGGCTC CTGCGCCGGC TCGAGTCCGA GATCTCGGAG CTGGGTTACG TCGAGGCCGC GCCGAAGCAG GACGGTCGAA ACATGATCAT GGTGCTCGCA CCGCACCGTG CCACCAAGGC TGCCGCCACG GCGGCCCGCG GCGGCGCGCT TCCGCGAGGC GAGCGGGAAT CCGGTGCCGC CGCGGCAGCA CCGCCGGCCG AGGCGGCCGG ACCCGCCGGA ACCGCCGGCG AGTAG
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Protein sequence | MNEQIRAREV RLVGPEGEQV GIVPLERALQ LAADVDLDLV EVAPMARPPV CKLMDFGKFK YESALKAREA RRNQQQTVIK EMKLRPKIDP HDYETKKGHV VRFLKAGDKV KVTIMFRGRE QSRPELGYRL LRRLESEISE LGYVEAAPKQ DGRNMIMVLA PHRATKAAAT AARGGALPRG ERESGAAAAA PPAEAAGPAG TAGE
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