Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_1853 |
Symbol | pyrB |
ID | 5058312 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 2118256 |
End bp | 2119182 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640474123 |
Product | aspartate carbamoyltransferase catalytic subunit |
Protein accession | YP_001158693 |
Protein GI | 145594396 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0540] Aspartate carbamoyltransferase, catalytic chain |
TIGRFAM ID | [TIGR00670] aspartate carbamoyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.822345 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.502816 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCGTC ACCTGCTCTC CAGCGCCGAC CTGGACGCTG GTACCGCCCT CCAGATCCTG GACACCGCCG CCGAGATGGC CACCGTGGCC GGGCGGGAGG TCAAGAAGCT GCCGGCGCTG CGCGGTCGGA CCGTGGTGAA CCTCTTCTAC GAGGACTCCA CCCGGACTCG GATCTCCTTC GAGGCCGCCG CCAAGCGGCT CAGTGCCGAC GTGATCAACT TTTCGGTCAA GGGGTCCAGC GTCGCCAAGG GTGAGAGTCT GAAGGACACC GCACTCACCC TCCAGGCGAT GGGCGCCGAC GCCGTCGTCG TCCGGCACCC CGCCTCCGGT GCCCCGTACC AGCTGGCCGA CTGGGTCGAC GGCTCCGTCG TCAACGCCGG CGACGGTACG CACGAGCACC CCACCCAGGC GCTACTCGAC GCGTACACGA TGCGTTCCCG GCTGGGCCGA CTCGCCGGCC TGTCGGTGGC GGTGGTCGGT GACGTGCTGC ACAGCCGGGT GGCACGCTCC AACGTCCTGC TGCTCTCCAC CCTCGGTGCC AAGGTCACCC TGGTCGGTCC GCCTCCGCTG ATCCCGGTGG ACATCGCGGC GGCCCTCGCG CCCAGCGCCG CCGTCTGCTA CGACCTGGAC GCGGTGCTGC CGCAGTCGGA CGTGGTCATG ATGCTGCGGG TGCAGCGGGA GCGCATGAAC GACTCCTACT TTCCGTCCGC CCGTGAGTAC GCCCGCCGTT ACGGCCTGGA CGGCTCACGG ATGCGGCGGC TGCCGGAGCA CGCGATCGTG ATGCATCCCG GTCCGATGAA CCGGGGCATG GAGATCACCT CCGAGGTGGC CGACTCGCCC CGCTCCACCA TTGTCGAACA GGTCGCCAAC GGCGTCTCCG TCCGGATGGC CGTCCTCTAC CTGCTACTCG GAGGGAACAA CCGGTGA
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Protein sequence | MIRHLLSSAD LDAGTALQIL DTAAEMATVA GREVKKLPAL RGRTVVNLFY EDSTRTRISF EAAAKRLSAD VINFSVKGSS VAKGESLKDT ALTLQAMGAD AVVVRHPASG APYQLADWVD GSVVNAGDGT HEHPTQALLD AYTMRSRLGR LAGLSVAVVG DVLHSRVARS NVLLLSTLGA KVTLVGPPPL IPVDIAAALA PSAAVCYDLD AVLPQSDVVM MLRVQRERMN DSYFPSAREY ARRYGLDGSR MRRLPEHAIV MHPGPMNRGM EITSEVADSP RSTIVEQVAN GVSVRMAVLY LLLGGNNR
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