Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_1832 |
Symbol | |
ID | 5058291 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 2097877 |
End bp | 2099862 |
Gene Length | 1986 bp |
Protein Length | 661 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640474102 |
Product | hypothetical protein |
Protein accession | YP_001158672 |
Protein GI | 145594375 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0514384 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCCGGGT TGTCTTTTCG TCGGCGGATT ATGGGTCGCC CTGTTCACGC GGCCGTGATC TGCTCGGTGG CCGTCGTCGC CGCGATGGTC GTACCATCCG CGGCTGTCGC CACCGTCCCG CCGGTGCCCG AGACACAGAT CCTGGTGTCG AGTGATCCGG TCGACGAGAC GCCGCACGCC CGCGACGGCG AGGTCCGTGC CTTCGCGCAG ATCGGCTCGA TGGTGTACGT CGGGGGCAGC TTCACCGAGA TTCGGCAGGA CCCGACTGCG GCGTGGGTCA GCCAGCGCTA CCTGTTCGGC TACGACAAGA CCACCGGGGT GATCTCGACG ACCTTTCTGC CGGTGCTCGA TGGCGCGGTG AGCTCGTTGG TCGCCGGTCC GAACGACACG TTGATCGTCG GTGGGGCCTT CCGGAACGCC AACGGGGCGT CCCGAAAGAA TCTGGTGGCG CTCGACCCGA GTACCGGCGC CACCGTCGAG GGCTGGGTGG GCCGCTCCGA CGGCGGCAAC GTGCGCGACA TGGCGCTGCA TGGCGACTGG CTCTACCTGG CGGGCGCCTT CAACTGGGTG AACGGCACCT CGCATGCCGG GCTCGCCCGA CTGCATGCCA GCACGGGGGC GATCGACCCG ACCTTCGCCA TCAACGCCAC GGTGGGGCGA AGCGGTACCA GTTCGTACGT CTGGACCATC GACGTCTCAC CGGACGGGGA GACGTTGATA GCGGGTGGCA ACTTCACCGA CGTCAACGGC CTGTCGCGGA ACCAGATAGC GCTCCTTGAC CTCTCTGGTA CGCCGAGCGT TCTCGACTGG AGTACGGAGA AGTTCGTGGC ACCGTGCGGT GGGCAGCCAG CTTTCTCCTA TCTGCAGGCT GTGCGGTTTG GCGGCGATGG CAGTTGGTTC GTCGTCGGTA CCAACGGCGG ATCGGGCTGG CCGGCGGCGT ACTGCGACGC GCTGGTGCGC TTCGAGACCG CGGCCCGCGG TGACGGTCAG CTCGGCACGT GGGTGAACTA CACCGGTAGG GACACCATCA CCTCAGTCGA GGTGGCCGAC AATGTCATCT ATCTCGGTGG GCACTTTCGC TGGCTGAACA ATCCGACCGC CCACCGGGGC GGCGCCGGCG ACGGCGCCAT TGACCGGCTC GGTATCGCCG CGGTCACCCC GGCCACCGGG ATGCCCGTGA ACTGGAATCC GCGTCGCAGC GGTGGCTCGT CGCTGCCCCC CGGCACCAGC CCCTGGGACT CCTCCGTGCC CGTGCTCTGG CGGGGCGACG ACGGGCTGTA CTTCGGGCAC AACTCTGATG GCATGGGTGG CGAGTACCAC GGCCGGCTCG GTATGTTCCC GCGCTCCGGT GGTCGGACGA TCACCCCGAA GAACCCGCCG ACCGCGACCA GCGGCAATCT CTACCTGGGC ATCGGGGAGG GCGAACTGGC CCGGGTCCCG TTCGACGGCA CCATGATCGG CTCGCCGACC ACGGTCAGCC AGCCGAACTA CACCGGCGCC GGGGCGACCT GGGGATTGAG TGACCGGATC TACTGGGCAC ACACCGTCGC CGGTACCCCG ACGGGTAGCC GGATCGACAT TTCAATGTTC AACGGGGGCA CGGTCGGCGC CCCGTGGGAG GCGTCCGGTT ACAACGACTG GTTCGACGCG GGCGACCTGA CCGGTGCCCT CTTTCTCGAC GGTCGCCTCT ACTACACCCG CTCTGGTGCC GACGCCCTGT ACTACCGGTA CTTCGAGACG GATGGGAACT ACCTCGGTGC CACCGAGTTC ACCCTCCCCA CCACCGGGGT TGACTGGTCG ACGGTGCGGG GTATGGCCTG GGTGGATGGC ACGATCGTGT ACGGAAGCAC CGACGGGAAC CTGCGCGTCG TCCCCTTCCG GCCAGCGGTC GACCCGGTGG TGGACGGCGC GGAAAGCGTC CTCCTCGCGA TGGCGAGCAC GGAGCTGACG TGGTCCACTC CACAGCTGTT TTTCGCCGTG CAGTAA
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Protein sequence | MAGLSFRRRI MGRPVHAAVI CSVAVVAAMV VPSAAVATVP PVPETQILVS SDPVDETPHA RDGEVRAFAQ IGSMVYVGGS FTEIRQDPTA AWVSQRYLFG YDKTTGVIST TFLPVLDGAV SSLVAGPNDT LIVGGAFRNA NGASRKNLVA LDPSTGATVE GWVGRSDGGN VRDMALHGDW LYLAGAFNWV NGTSHAGLAR LHASTGAIDP TFAINATVGR SGTSSYVWTI DVSPDGETLI AGGNFTDVNG LSRNQIALLD LSGTPSVLDW STEKFVAPCG GQPAFSYLQA VRFGGDGSWF VVGTNGGSGW PAAYCDALVR FETAARGDGQ LGTWVNYTGR DTITSVEVAD NVIYLGGHFR WLNNPTAHRG GAGDGAIDRL GIAAVTPATG MPVNWNPRRS GGSSLPPGTS PWDSSVPVLW RGDDGLYFGH NSDGMGGEYH GRLGMFPRSG GRTITPKNPP TATSGNLYLG IGEGELARVP FDGTMIGSPT TVSQPNYTGA GATWGLSDRI YWAHTVAGTP TGSRIDISMF NGGTVGAPWE ASGYNDWFDA GDLTGALFLD GRLYYTRSGA DALYYRYFET DGNYLGATEF TLPTTGVDWS TVRGMAWVDG TIVYGSTDGN LRVVPFRPAV DPVVDGAESV LLAMASTELT WSTPQLFFAV Q
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