Gene Strop_1832 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1832 
Symbol 
ID5058291 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2097877 
End bp2099862 
Gene Length1986 bp 
Protein Length661 aa 
Translation table11 
GC content68% 
IMG OID640474102 
Producthypothetical protein 
Protein accessionYP_001158672 
Protein GI145594375 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0514384 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCGGGT TGTCTTTTCG TCGGCGGATT ATGGGTCGCC CTGTTCACGC GGCCGTGATC 
TGCTCGGTGG CCGTCGTCGC CGCGATGGTC GTACCATCCG CGGCTGTCGC CACCGTCCCG
CCGGTGCCCG AGACACAGAT CCTGGTGTCG AGTGATCCGG TCGACGAGAC GCCGCACGCC
CGCGACGGCG AGGTCCGTGC CTTCGCGCAG ATCGGCTCGA TGGTGTACGT CGGGGGCAGC
TTCACCGAGA TTCGGCAGGA CCCGACTGCG GCGTGGGTCA GCCAGCGCTA CCTGTTCGGC
TACGACAAGA CCACCGGGGT GATCTCGACG ACCTTTCTGC CGGTGCTCGA TGGCGCGGTG
AGCTCGTTGG TCGCCGGTCC GAACGACACG TTGATCGTCG GTGGGGCCTT CCGGAACGCC
AACGGGGCGT CCCGAAAGAA TCTGGTGGCG CTCGACCCGA GTACCGGCGC CACCGTCGAG
GGCTGGGTGG GCCGCTCCGA CGGCGGCAAC GTGCGCGACA TGGCGCTGCA TGGCGACTGG
CTCTACCTGG CGGGCGCCTT CAACTGGGTG AACGGCACCT CGCATGCCGG GCTCGCCCGA
CTGCATGCCA GCACGGGGGC GATCGACCCG ACCTTCGCCA TCAACGCCAC GGTGGGGCGA
AGCGGTACCA GTTCGTACGT CTGGACCATC GACGTCTCAC CGGACGGGGA GACGTTGATA
GCGGGTGGCA ACTTCACCGA CGTCAACGGC CTGTCGCGGA ACCAGATAGC GCTCCTTGAC
CTCTCTGGTA CGCCGAGCGT TCTCGACTGG AGTACGGAGA AGTTCGTGGC ACCGTGCGGT
GGGCAGCCAG CTTTCTCCTA TCTGCAGGCT GTGCGGTTTG GCGGCGATGG CAGTTGGTTC
GTCGTCGGTA CCAACGGCGG ATCGGGCTGG CCGGCGGCGT ACTGCGACGC GCTGGTGCGC
TTCGAGACCG CGGCCCGCGG TGACGGTCAG CTCGGCACGT GGGTGAACTA CACCGGTAGG
GACACCATCA CCTCAGTCGA GGTGGCCGAC AATGTCATCT ATCTCGGTGG GCACTTTCGC
TGGCTGAACA ATCCGACCGC CCACCGGGGC GGCGCCGGCG ACGGCGCCAT TGACCGGCTC
GGTATCGCCG CGGTCACCCC GGCCACCGGG ATGCCCGTGA ACTGGAATCC GCGTCGCAGC
GGTGGCTCGT CGCTGCCCCC CGGCACCAGC CCCTGGGACT CCTCCGTGCC CGTGCTCTGG
CGGGGCGACG ACGGGCTGTA CTTCGGGCAC AACTCTGATG GCATGGGTGG CGAGTACCAC
GGCCGGCTCG GTATGTTCCC GCGCTCCGGT GGTCGGACGA TCACCCCGAA GAACCCGCCG
ACCGCGACCA GCGGCAATCT CTACCTGGGC ATCGGGGAGG GCGAACTGGC CCGGGTCCCG
TTCGACGGCA CCATGATCGG CTCGCCGACC ACGGTCAGCC AGCCGAACTA CACCGGCGCC
GGGGCGACCT GGGGATTGAG TGACCGGATC TACTGGGCAC ACACCGTCGC CGGTACCCCG
ACGGGTAGCC GGATCGACAT TTCAATGTTC AACGGGGGCA CGGTCGGCGC CCCGTGGGAG
GCGTCCGGTT ACAACGACTG GTTCGACGCG GGCGACCTGA CCGGTGCCCT CTTTCTCGAC
GGTCGCCTCT ACTACACCCG CTCTGGTGCC GACGCCCTGT ACTACCGGTA CTTCGAGACG
GATGGGAACT ACCTCGGTGC CACCGAGTTC ACCCTCCCCA CCACCGGGGT TGACTGGTCG
ACGGTGCGGG GTATGGCCTG GGTGGATGGC ACGATCGTGT ACGGAAGCAC CGACGGGAAC
CTGCGCGTCG TCCCCTTCCG GCCAGCGGTC GACCCGGTGG TGGACGGCGC GGAAAGCGTC
CTCCTCGCGA TGGCGAGCAC GGAGCTGACG TGGTCCACTC CACAGCTGTT TTTCGCCGTG
CAGTAA
 
Protein sequence
MAGLSFRRRI MGRPVHAAVI CSVAVVAAMV VPSAAVATVP PVPETQILVS SDPVDETPHA 
RDGEVRAFAQ IGSMVYVGGS FTEIRQDPTA AWVSQRYLFG YDKTTGVIST TFLPVLDGAV
SSLVAGPNDT LIVGGAFRNA NGASRKNLVA LDPSTGATVE GWVGRSDGGN VRDMALHGDW
LYLAGAFNWV NGTSHAGLAR LHASTGAIDP TFAINATVGR SGTSSYVWTI DVSPDGETLI
AGGNFTDVNG LSRNQIALLD LSGTPSVLDW STEKFVAPCG GQPAFSYLQA VRFGGDGSWF
VVGTNGGSGW PAAYCDALVR FETAARGDGQ LGTWVNYTGR DTITSVEVAD NVIYLGGHFR
WLNNPTAHRG GAGDGAIDRL GIAAVTPATG MPVNWNPRRS GGSSLPPGTS PWDSSVPVLW
RGDDGLYFGH NSDGMGGEYH GRLGMFPRSG GRTITPKNPP TATSGNLYLG IGEGELARVP
FDGTMIGSPT TVSQPNYTGA GATWGLSDRI YWAHTVAGTP TGSRIDISMF NGGTVGAPWE
ASGYNDWFDA GDLTGALFLD GRLYYTRSGA DALYYRYFET DGNYLGATEF TLPTTGVDWS
TVRGMAWVDG TIVYGSTDGN LRVVPFRPAV DPVVDGAESV LLAMASTELT WSTPQLFFAV
Q