Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_1828 |
Symbol | alaS |
ID | 5058287 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 2092523 |
End bp | 2095201 |
Gene Length | 2679 bp |
Protein Length | 892 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640474098 |
Product | alanyl-tRNA synthetase |
Protein accession | YP_001158668 |
Protein GI | 145594371 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0013] Alanyl-tRNA synthetase |
TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.222093 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGACGG CGGAGATCAG GCGGCGGTAC CTCGCGCACT TCGAGGCGAA CGGTCACGCC GTGGTGCCGT CCGCTCCGCT GCCCGCCATC AGCGACCCGA ACCTGCTGTT TGTCGCCGCC GGCATGATGC AGTTCGTCCC CTACTTCCTG GGGCAGCAGA CCGCTCCCTA CAAGCGGGCC GTCAGCGTGC AGAAGTGCCT CCGTACGCCG GATATCGACG AGGTGGGCAA GACCAGCCGG CACGGCACGT TCTTCCAGAT GAACGGCAAC TTCTCGTTTG GGGACTACTT CAAGGACGAG GCGATCCCGC TCGCCTGGGA GCTGTCCACC AAGCCGGTTG ACGCCGGGGG ACTCGGACTC GACCCGGATC GGATCTGGCC GACGGTCTAC CTCGACGACG ACGAGGCGTT CCAGATCTGG CGATCGGTCG GGGTGCCGGC GGATCGGATC GTGCGTCGCG GCAAGGCTGA CAACTTCTGG TCGATGGGCA TTCCCGGGCC GTGCGGGCCC TGCTCCGAGC TGTTCTACGA CCGTGGCCCC GAGTACGGCC GGGAGGGCGG TCCGGAGGTT GACGAGGATC GGTACCTGGA GTTCTGGAAC CTCGTCTTCA TGCAGTTCGA GCGGGGACCG GGCACCGGCA AGGAGGACTA CCCGATCCTC GGTGACCTGC CGGCGAAGAA CATCGACACC GGGATGGGCC TGGAGCGGAT GGCCTCCATC CTCCAGGGCG TGGACAACCT CTACGAGATC GACGAGGTGC GGCCGATCCT GGCCAAGGCC GCCGAGCTGA CCGGCAAACG GTATGGCGCG CACTCCGGTC AGGTCGCCAG CGAGTCGCAC CCGGATGACG TCCGGCTGCG GGTCGTCGCC GACCATGTCC GCACCGCCCT GATGTTGATC GGTGACGGGG TGATCCCGAG TAATGAGGGG CGGGGCTACG TGCTGCGCCG CATCATGCGC CGGGCGATCC GTTCGATCCG GCTGCTGGGC TGGCAGGAAC GGGCGATGCC CGAGCTGCTG CCGGTGGCCC GCGACTGCAT GTCCGCGTCA TACCCGGAGC TGGCGACCGA CTTTGGCCGG ATCGCCGACT ACGCGTACGC GGAGGAGGAT GCGTTCCTGT CCACGCTGCG TGCCGGCACC ACGATCCTGG ACACCGCCAT CGCCGAAACC CGTACCGCGG GCCGGCGGGC GATCTCCGGT GCGAAGGCGT TTCAGCTGCA CGACACGTAC GGCTTCCCGA TCGACCTGAC CCTGGAGATC GCGAGCGAGC AGGGTCTACA GGTCGACGCC GAGGGTTTCC GTCGGCTGAT GGCCGACCAG CGGGCTCGGG CGAAGGCCGA CGCGCAGGCC CGTAAGACGG GGCACGTGGA CCTGTCCGCG TACCGGACGG TGCTGGACGA GGGCGGCCCG GTCACCTTCA CCGGCTACCA GGAGGTCTCC CGCGAGTCGA CGGTGCGGGC GGTGCTCGGC GCGGCCAGTC CGCACGCCGC GGCGGTGGAG GGCGAAACGG TCGAGCTGGT CCTCGACACC ACCCCGTTCT ACGCCGAGGG TGGTGGCCAG CAGCCGGACC TGGGCGTGAT CACCGTCGGT GGGGGCCAGG TGGAGGTCCT CGACGTGCAG CAGCCGGTAC CGGGGTTGAT CGTCCACCGG GCCCGGGTGC TGCGGGGTGA GGTGCGCGTG GGCGAGACCG GCTTCGCCGA GATCGACACT GATCGCCGTC GGGCGATCTC CCGGTCGCAC ACCGCGACCC ACCTCGTGCA CCAGACCATG CGCAACTTCC TCGGTGAGTC CGCCACCCAG GCCGGTTCGC TGAACGCACC GGGGCGGCTT CGGTTCGACT TCAACACCCC GACCGGGGTG GCACCGAGCG TCCTGCGGGA TGTGGAACAG CAGGTCAACG AGGCGCTCCT CGCCGACCTG GAGGTGCGTG CGTTCGTTAC CTCGCTGGCC GAGGCGCGGC GTATCGGTGC GATGGCGCTC TTCGGCGAGA AGTACGGCGA GCAGGTGCGA GTCGTCGAGG TCGGTGACTA CGCGCGAGAG CTGTGCGGTG GTACCCACGT GGGCCGTTCC GGCCAGCTCG GCCTGGTGAA GATCCTTTCT GAGTCGTCGA TCGGGTCCGG GGTTCGCCGG GTCGAGGCGT TGGTCGGGAT TGACGCGTTC AACTTCCTTG CCCGCGAGCA CCTGCTCGTC GCCCGCCTCG CCGAGCTGTA CCGGGTGCCA TCCGACCAGG TCGCGGAGCG GGTGGAGCAG ACCGTCACCC AGCTGCGCGA CGCCGAGAAG GAACTGGAGA AGCTCCGCGC GCAGCTGGTG CTCGGCGGCG CGGCCGCCCT CGCTGCCCAG GCGAGCGAGG TGCGTGGGGT GGCGTACGTC GGGACCGAGG CGCCCGAGGG TGCGGCCGGC AACGATGTGC GGACCCTCGC GCAGGAGATC CGGAGCCGGA TCGATCCGGC GCGTCCTGCG GTGGTCGCGG TGGCGGCCCG GGCGAACGGC AAGGCTTCCC TGGTGGTGGC GGTCAACCCA GCGGCGCGCA GTCAGGGGCT GTCAGCGGCG GATCTGGTCA AGGTAGCCTT CGCCGGCCGG GGTGGGGGCA GCCCCGAGTT GGCCCAGGGG GGCGGTCTGC CGGCGGCGGA GGCGCCGGGG TTGCTTCGGA CCGTCGAGAA TGCCATCGCC GGGGCGTAA
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Protein sequence | MKTAEIRRRY LAHFEANGHA VVPSAPLPAI SDPNLLFVAA GMMQFVPYFL GQQTAPYKRA VSVQKCLRTP DIDEVGKTSR HGTFFQMNGN FSFGDYFKDE AIPLAWELST KPVDAGGLGL DPDRIWPTVY LDDDEAFQIW RSVGVPADRI VRRGKADNFW SMGIPGPCGP CSELFYDRGP EYGREGGPEV DEDRYLEFWN LVFMQFERGP GTGKEDYPIL GDLPAKNIDT GMGLERMASI LQGVDNLYEI DEVRPILAKA AELTGKRYGA HSGQVASESH PDDVRLRVVA DHVRTALMLI GDGVIPSNEG RGYVLRRIMR RAIRSIRLLG WQERAMPELL PVARDCMSAS YPELATDFGR IADYAYAEED AFLSTLRAGT TILDTAIAET RTAGRRAISG AKAFQLHDTY GFPIDLTLEI ASEQGLQVDA EGFRRLMADQ RARAKADAQA RKTGHVDLSA YRTVLDEGGP VTFTGYQEVS RESTVRAVLG AASPHAAAVE GETVELVLDT TPFYAEGGGQ QPDLGVITVG GGQVEVLDVQ QPVPGLIVHR ARVLRGEVRV GETGFAEIDT DRRRAISRSH TATHLVHQTM RNFLGESATQ AGSLNAPGRL RFDFNTPTGV APSVLRDVEQ QVNEALLADL EVRAFVTSLA EARRIGAMAL FGEKYGEQVR VVEVGDYARE LCGGTHVGRS GQLGLVKILS ESSIGSGVRR VEALVGIDAF NFLAREHLLV ARLAELYRVP SDQVAERVEQ TVTQLRDAEK ELEKLRAQLV LGGAAALAAQ ASEVRGVAYV GTEAPEGAAG NDVRTLAQEI RSRIDPARPA VVAVAARANG KASLVVAVNP AARSQGLSAA DLVKVAFAGR GGGSPELAQG GGLPAAEAPG LLRTVENAIA GA
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