| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1824 |
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| Symbol | |
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| ID | 5058283 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 2087754 |
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| End bp | 2089187 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640474094 |
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| Product | recombination factor protein RarA |
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| Protein accession | YP_001158664 |
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| Protein GI | 145594367 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2256] ATPase related to the helicase subunit of the Holliday junction resolvase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00142888 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.964955 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGGGT TCACGCCAGT CGGGGACGAC GCGCCGCTGG CCGTCCGAAT GCGCCCGACC
GGCCTCGACG AGCTGATTGG CCAGGACCAC CTGCGTGCCC CCGGTGCTCC GTTACACCAA
CTCGTCTCCG GGGCCGCACC GATGTCGGTG ATCCTCTGGG GGCCGCCCGG CAGTGGGAAG
ACCACCATCG CGCACCTGGT GGCTGGGGCG ACCGACCGTC GCTTCGTGGC GATGTCGGCG
CTGAACGCCG GGGTGAAGGA CGTCCGTGCC GTCATCGACG CCGCCCGCCG GCAGCGCCGC
GCCGGCGGCC CGCAGACCGT GCTCTTTATT GATGAGGTGC ATCGGTTCAG CAAGACCCAA
CAGGATTCGC TCCTCGCCGC GGTCGAGGAC CGGACCGTCA CGTTGCTGGC GGCGACGACC
GAGAACCCAT ACTTCTCGGT CATCTCGCCG CTGTTGTCTC GGTGCGTGCT CCTCACCCTG
CAGCCACTGG ACGACGACGC GGTGCGGAGT CTGCTCCGTC GCGCGGTCGT CGACGGTCGC
GGCCTGGGCG GCACGCCTGT CCTCGCCCCC GAGGCCGAGG AGCATCTGGT CCGGCTCGCC
GCCGGTGACG TCCGCAAGGC GCTCACCGCC CTGGAGGCCG CGGCCGCCTC TGCCACCGCG
GTCGGTGCCC GCCGCATCGA CCTACCCACC GCCGAGCAGG CGGTGGACAG CGCCGCCGTC
CGCTACGACC GTGACGGTGA CAGCCACTAC GACGTGACCA GCGCGTTCAT CAAGAGCATG
CGCGGCTCCG ACGTGGACGC CGCGCTGCAC TGGTTGGCCC GGATGCTGGT CGCCGGCGAG
GACCCGCGGT TCATCGCCCG TCGGATGGTC ATCTTCGCCA GCGAGGACGT CGGTATGGCC
GACCCGGGTG CGCTCGGCGT GGCCACCGCC GCCGCCCACG CGGTGGAGTA CGTCGGCCTG
CCGGAGGCCC AGCTCAACCT CGCCCAGGCG GTGATCCACC TGACCACGGC CCCGAAATCG
AACTCGGCGA CCACCGCCAT CGGGGCGGCC CTCGCTGATG TCCGGGCTGG GCGGGGTGGC
TCGGTGCCGC GTGGGCTACG GGACGCGCAC TACCCCGGCG CCAAAGGGCT CGGCCACGGC
ACCGGCTACC GCTATCCCCA CGACGACCAG CGGGGTGTGG TCAACCAGCA GTACGTGCCG
GACGACCTCG TCGGCACCGA CTACTACCGG CCCAGCCAGC ATGGTGCCGA GCGAGCCGTC
GCCGACCGAC TGCCGCTGCT GCGGCGGATC ATTCGCCAGT CGTCGCCAAC GGCTGACCGC
CGGCCGACGG CGTCCTGCGG TGCCGGGTTG GGCAACAGCC GCCCACCCGA GAGATCGGGT
GACGACGCGG CGTACGAGGG TGGCAGAGAC GCCACTGAGG AGGGGCAGCA GTGA
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| Protein sequence | MAGFTPVGDD APLAVRMRPT GLDELIGQDH LRAPGAPLHQ LVSGAAPMSV ILWGPPGSGK
TTIAHLVAGA TDRRFVAMSA LNAGVKDVRA VIDAARRQRR AGGPQTVLFI DEVHRFSKTQ
QDSLLAAVED RTVTLLAATT ENPYFSVISP LLSRCVLLTL QPLDDDAVRS LLRRAVVDGR
GLGGTPVLAP EAEEHLVRLA AGDVRKALTA LEAAAASATA VGARRIDLPT AEQAVDSAAV
RYDRDGDSHY DVTSAFIKSM RGSDVDAALH WLARMLVAGE DPRFIARRMV IFASEDVGMA
DPGALGVATA AAHAVEYVGL PEAQLNLAQA VIHLTTAPKS NSATTAIGAA LADVRAGRGG
SVPRGLRDAH YPGAKGLGHG TGYRYPHDDQ RGVVNQQYVP DDLVGTDYYR PSQHGAERAV
ADRLPLLRRI IRQSSPTADR RPTASCGAGL GNSRPPERSG DDAAYEGGRD ATEEGQQ
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