Gene Strop_1802 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1802 
Symbol 
ID5058261 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp2061666 
End bp2062358 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content71% 
IMG OID640474073 
ProductABC transporter related 
Protein accessionYP_001158643 
Protein GI145594346 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.639319 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCGCA TTGAGAACCT CTCCGCCTGG TACGGCGAGG CGCAGGTGCT GCGGGACGCC 
GGTCTCCACG TGCGTCGCGG CGAGGTGGTC ACCCTGGTCG GCCGCAACGG CGCCGGCAAG
TCGACCCTGC TGCGGTGCGT CATGGGCCTG CACGCCGGCT GGCGGGGCAC CGTCGAGCTG
AGCGGGAGCG AGATCGGCAA ACTGTCGGCG GACCGGCGGG CGCGGCTGGG ACTCGGCTGG
GTCCCCGACG ACCGGGGTAG CTACGCCACG TTGACCGTGA CGGAGAATCT GACCCTGCCG
CCCACCGTTG GGCCGGACCC ATGGTCGCTG GAGCGGGTGT ACGAGGCGTT CCCCGCCCTG
TACGAGCGGC GCGGCTCGGC CGCCACGACA CTCTCCGGCG GCGAGCAACA GATGCTGGCG
CTGGCCCGGG TCCTGCGGAT GGGCGCCCGC ATGCTGCTCT GCGACGAACC GACCGAGGGG
CTGTCGCCGC TGCTCGTGCA GCAGGTTGGT GACCTGCTGC ACGAAGCCAA GCGGCACGGG
GTGACGGTGC TGCTGGTCGA GCAGAACCTG CGCTTCGCCA CCAGCGTCGC CGACCGGCAC
TACCTGCTGG CCGAGGGGCG CGTCGCGGCG GCGATGGAGA ACTCCGAGGT GCGGTCGCGG
GAACGCGAAC TGCTGTCTTA CCTCGGCATC TGA
 
Protein sequence
MLRIENLSAW YGEAQVLRDA GLHVRRGEVV TLVGRNGAGK STLLRCVMGL HAGWRGTVEL 
SGSEIGKLSA DRRARLGLGW VPDDRGSYAT LTVTENLTLP PTVGPDPWSL ERVYEAFPAL
YERRGSAATT LSGGEQQMLA LARVLRMGAR MLLCDEPTEG LSPLLVQQVG DLLHEAKRHG
VTVLLVEQNL RFATSVADRH YLLAEGRVAA AMENSEVRSR ERELLSYLGI