Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_1802 |
Symbol | |
ID | 5058261 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 2061666 |
End bp | 2062358 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640474073 |
Product | ABC transporter related |
Protein accession | YP_001158643 |
Protein GI | 145594346 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.639319 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCGCA TTGAGAACCT CTCCGCCTGG TACGGCGAGG CGCAGGTGCT GCGGGACGCC GGTCTCCACG TGCGTCGCGG CGAGGTGGTC ACCCTGGTCG GCCGCAACGG CGCCGGCAAG TCGACCCTGC TGCGGTGCGT CATGGGCCTG CACGCCGGCT GGCGGGGCAC CGTCGAGCTG AGCGGGAGCG AGATCGGCAA ACTGTCGGCG GACCGGCGGG CGCGGCTGGG ACTCGGCTGG GTCCCCGACG ACCGGGGTAG CTACGCCACG TTGACCGTGA CGGAGAATCT GACCCTGCCG CCCACCGTTG GGCCGGACCC ATGGTCGCTG GAGCGGGTGT ACGAGGCGTT CCCCGCCCTG TACGAGCGGC GCGGCTCGGC CGCCACGACA CTCTCCGGCG GCGAGCAACA GATGCTGGCG CTGGCCCGGG TCCTGCGGAT GGGCGCCCGC ATGCTGCTCT GCGACGAACC GACCGAGGGG CTGTCGCCGC TGCTCGTGCA GCAGGTTGGT GACCTGCTGC ACGAAGCCAA GCGGCACGGG GTGACGGTGC TGCTGGTCGA GCAGAACCTG CGCTTCGCCA CCAGCGTCGC CGACCGGCAC TACCTGCTGG CCGAGGGGCG CGTCGCGGCG GCGATGGAGA ACTCCGAGGT GCGGTCGCGG GAACGCGAAC TGCTGTCTTA CCTCGGCATC TGA
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Protein sequence | MLRIENLSAW YGEAQVLRDA GLHVRRGEVV TLVGRNGAGK STLLRCVMGL HAGWRGTVEL SGSEIGKLSA DRRARLGLGW VPDDRGSYAT LTVTENLTLP PTVGPDPWSL ERVYEAFPAL YERRGSAATT LSGGEQQMLA LARVLRMGAR MLLCDEPTEG LSPLLVQQVG DLLHEAKRHG VTVLLVEQNL RFATSVADRH YLLAEGRVAA AMENSEVRSR ERELLSYLGI
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