Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_1797 |
Symbol | |
ID | 5058256 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 2053155 |
End bp | 2054375 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640474068 |
Product | histidine kinase, dimerisation and phosphoacceptor region |
Protein accession | YP_001158638 |
Protein GI | 145594341 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4585] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGGCTGG CCGTGACCGT GCTGGCCGTA ACCAGCCTCA CTCTCATCCG CGGCACGGGT CTGTTCCTGC TCGGCCCGCC ACCGTCGTTC GCCGAACAGC TGCTCTGGGC CGTCGCGGTG GGCCTACCGC TGATCTGGCG GCGACGCTTC CCCGTGGCGA CGACGCTGGT CATCTCGGTC GCGTTCGTCG CGGCACAAGC CCGCTCCGCA CCGGAGACGC GGGTCACCAC GGGGGTGCTG TTCACGGCCA TCTACACCCT CGGCGCCTGG GGACCGGACC GCCGCCTGGC CCGTCGGATT CGGATCGGCG TGATCGCCGC CATGTTCGGT TGGATCGGTT TCTGGTACTC GGTCAATCTG GGCAGCGTGC TGGCGGACCC GCCCCCCGAC GCGTTCGCCG ACGCCGTGGG ACCGATCCCC CCGCTGATCG CCGCGGTGCT CAGCGACATG CTCCTCAACA TCCTGTTCTT CGGGTTCGCC TACTTCTTCG GAGAGATCGC CTGGCTGGCC GCCCGACGCG AGCACGAACT CCAGGCGCAG GCCGACGAGC TACGCCGGTC ACAGGCCGAG GTCAGGGCAC ACGCGGTGGT CGGGGAGCGG GTTCGGATCG CCCGGGAACT GCATGACGTC GTCGCCCACC ACGTCTCGGT GATGGGGGTG CAGGCTGCCG CCTGCCGCCG GGTCCTCGAC CGGGATCCGG CCAAGGCCCG CACCGCCCTG GCGGCGGTCG AAGAGTCGGC CCGCACGGCG GTGGACGAGC TCCGCCGGAT GCTCGGCGTC CTGCGGGCCC GCGACCACGA GCCGGGCACC GTCGACTCGC CCGCCGGAAT CAGCCGGGTC ACCACAGTGG TCGAGCGGGC ACGCGAGACC GGGCTACGCG CCACGCTGGG GGTGTACGGC GACCCGGTGC CGATCTCAGA CTCGATCTCC CAGGCGGCGT ACCGGACCGT GCAGGAAGCC GTGACGAACA CGCTCAAACA CGCCGGCGCG GCGACCATCC TGGATGTCCG GATCCGCTAT CTGACGCACG AGGTGGAGGT GGACGTGACC GACGACGGAC GAAGCAGCAG CACGATGAAT GCGGACGGGG TGGGCCTGGT CGGCATGCGC GAGCGGGTCG CCGCCCATGG CGGCACGCTG GAGGTCGGCC CCCGCGCCGC CGGCGGCTGG CGGGTGCGGG CCCGCTTCCC GCTACCGCTG ACCGAGCGGC AGGCGGCGTG A
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Protein sequence | MGLAVTVLAV TSLTLIRGTG LFLLGPPPSF AEQLLWAVAV GLPLIWRRRF PVATTLVISV AFVAAQARSA PETRVTTGVL FTAIYTLGAW GPDRRLARRI RIGVIAAMFG WIGFWYSVNL GSVLADPPPD AFADAVGPIP PLIAAVLSDM LLNILFFGFA YFFGEIAWLA ARREHELQAQ ADELRRSQAE VRAHAVVGER VRIARELHDV VAHHVSVMGV QAAACRRVLD RDPAKARTAL AAVEESARTA VDELRRMLGV LRARDHEPGT VDSPAGISRV TTVVERARET GLRATLGVYG DPVPISDSIS QAAYRTVQEA VTNTLKHAGA ATILDVRIRY LTHEVEVDVT DDGRSSSTMN ADGVGLVGMR ERVAAHGGTL EVGPRAAGGW RVRARFPLPL TERQAA
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