| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1713 |
|---|
| Symbol | |
|---|
| ID | 5058172 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | + |
|---|
| Start bp | 1965714 |
|---|
| End bp | 1966409 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640473985 |
|---|
| Product | ThiJ/PfpI domain-containing protein |
|---|
| Protein accession | YP_001158555 |
|---|
| Protein GI | 145594258 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0693] Putative intracellular protease/amidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.45636 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAAAGA TCCTGTTCGT GGTGACCGGC GCTGACCACT GGGAGCTCGC CGACGGCACC
CGGCATCCCA CCGGCGTCTG GGCCGAGGAG ATCGTGGTTC CCCACGAGAT GTTGACCAGC
GCCGGCCACG AGGTCGTGAT CGCCACCCCG GACGGGGTGG TGCCGCGGGT GGACCGGGGC
AGCCTGCTGC CGGAGTTCAC CGGTGGGCCG GCGGGCGCTG TCCGGATGAC CGAAGCCGTG
GAGGGCCTCG AGGGCCTGCG CAAGCCGATC CGCCTGGCGG AGGTCGACCT CGACGAGTAC
CAGGCTGTCT TCTATCCGGG TGGTCACGGG CCGATGGAGG ACCTGGCGGT TGACCAGGAC
TCCGGTCGGC TGCTGGTGGC CGCCCAGCAG GCGAAGAAGC CGCTCGGCAT CGTCTGTCAC
GGACCGGCGG CGCTGCTCGC CGCGGTGACC GCCGATGGCA GCAACGCCTT CGCCGGATGC
CGGGTGGCGG CCTTCACCAA CGTGGAGGAG GCCCAGGCCG GCTTTGCCGA CAAGGCCAAG
TGGTTGCTCC AGGATCGCCT GGTCGACATC GGCGTGCAGT TCCAGGAAGG CGAGGCGTGG
GCGCCGAACG TGGTCGTCGA CGGCAACCTG ATCACCGGGC AGAACCCGGC CTCCTCCGAA
CAGGTCGCCA CGGAGCTGCT GGCTAAACTG AGCTGA
|
|---|
| Protein sequence | MSKILFVVTG ADHWELADGT RHPTGVWAEE IVVPHEMLTS AGHEVVIATP DGVVPRVDRG
SLLPEFTGGP AGAVRMTEAV EGLEGLRKPI RLAEVDLDEY QAVFYPGGHG PMEDLAVDQD
SGRLLVAAQQ AKKPLGIVCH GPAALLAAVT ADGSNAFAGC RVAAFTNVEE AQAGFADKAK
WLLQDRLVDI GVQFQEGEAW APNVVVDGNL ITGQNPASSE QVATELLAKL S
|
|---|
| |