Gene Strop_1707 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1707 
Symbol 
ID5058166 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1955813 
End bp1956973 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content72% 
IMG OID640473979 
ProductZn-dependent hydrolase of the beta-lactamase fold-like protein 
Protein accessionYP_001158549 
Protein GI145594252 
COG category[R] General function prediction only 
COG ID[COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.554659 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGGCAC CAACAGAGCG GGGCCGTCAG CGCAGGACGG GCGGGCGGCG GCTCGGCGGG 
GCCGTCGGGA TGGCCGCGCT CGCCGGCCTC GGGTGGGCGG TCCGGGATGT CCCGCTGGCC
CTCGGCGGCC GGCTGGCCGG CGCTCGAGCC GAGCGCGCCC TCAGCTCGCC GCAGTACCGG
GCCGGCGCCT TCCGAAACCC GGCCAGCAGC CGACCCGCCG CCAGCCCCAC GACCGGCTCC
ACGGACCGTA ACCTGCTCCG CGAGTTCTTC TTCGGTAAAC AGAAACGCCA CCCGAGTCTG
CCGGTGCCGC TGGTGCGCCC GGCACACGCC CCGGAGTCGT CGACGCGCTC CCGCGAGCTG
AACGTGGTCT GGTACGGCCA CGCCTCCACT CTGGTCGAGA TCGAGACGCA CCGGGTGCTG
ATCGATCCGG TGTGGAGTCA GCGATGCTCC CCGTCTAACC TGATCGGGCC CAAGCGGCTC
CACGAGCCAC CGATCGGCCT CGCCGAGTTG CCGACGGTGG ACGCGATCCT GATCTCCCAC
GACCACTACG ACCACCTCGA CCTCGAAACC GTACGGGAGC TGACCGCACG GCAGGACGCA
CCGTTCGTGG TGCCGCTCGG GGTGGGGGCC CACCTGGAGC GGTGGGGGGT CCCGGAGCGC
CGGATCGTGG AGCTGGACTG GTCGGAGAGT CACGAGGTGG CGGGGTTGCG GCTCACCGCC
ACCCCAGCCC AGCACTTCTC CGGGCGGGGC CTGCGCCGGG ACGCCACCCT CTGGAGCTCC
TGGGTGATCG CCGGGGCGCA CCGAAGCGTC TTCTACACCG GCGACTCCGG CTACTTCGAC
GGGTATGCTG CCATCGGTGC CGGCTACGGG CCCTTTGATG TGACCTTGAT GCAAATCGGC
GCCTATGACT GGGCCTGGCG GGATATTCAC ATGTTCCCGG AGGAGGCCGT CGCCGCCCAC
CTCGACCTGC GCGGCGGGCT GCTTCTCCCG GTGCACTGGG CGACCTTCAA CCTCGCCGTG
CACGACTGGT CGGAGCCGGT GGACCGGCTC TGGGCCGAGA CGAAGGCGCG GGACGTTCGA
CTGACGGTGC CCCGGCCGGG CCAGCGGGTG GTGGTTGACG ACCCACCGCC GGTGGACGGC
TGGTGGCAGG CGGTCGCCTG A
 
Protein sequence
MGAPTERGRQ RRTGGRRLGG AVGMAALAGL GWAVRDVPLA LGGRLAGARA ERALSSPQYR 
AGAFRNPASS RPAASPTTGS TDRNLLREFF FGKQKRHPSL PVPLVRPAHA PESSTRSREL
NVVWYGHAST LVEIETHRVL IDPVWSQRCS PSNLIGPKRL HEPPIGLAEL PTVDAILISH
DHYDHLDLET VRELTARQDA PFVVPLGVGA HLERWGVPER RIVELDWSES HEVAGLRLTA
TPAQHFSGRG LRRDATLWSS WVIAGAHRSV FYTGDSGYFD GYAAIGAGYG PFDVTLMQIG
AYDWAWRDIH MFPEEAVAAH LDLRGGLLLP VHWATFNLAV HDWSEPVDRL WAETKARDVR
LTVPRPGQRV VVDDPPPVDG WWQAVA