| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1706 |
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| Symbol | |
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| ID | 5058165 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 1953291 |
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| End bp | 1955702 |
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| Gene Length | 2412 bp |
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| Protein Length | 803 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640473978 |
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| Product | RNA-binding S1 domain-containing protein |
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| Protein accession | YP_001158548 |
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| Protein GI | 145594251 |
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| COG category | [K] Transcription |
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| COG ID | [COG2183] Transcriptional accessory protein |
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| TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.96157 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCCTCT CTGTTTCTCA GCGGATCGCC GAGGAGCTCG GCGTCGCCGA GCGCCAGGTA
CACGCAGCCG TGGAACTACT CGACGGCGGC GCGACCGTGC CGTTCATCGC CCGCTACCGC
AAGGAGGCCA CCGGCCTGCT CGATGACACC CAGCTGCGTA CTCTCGAGGA GAGACTGCGC
TACCTGCGCG AGTTGGACCA GCGGCGGGCC GCCATCCTGG AGTCCATCGG CAGCCAGGGC
AAGCTCGACG AGGCCCTGAC CGCACAGATC ATGGCCGCCG ACTCGAAGTC TCGGCTGGAG
GACATCTACC TGCCGTACAA GCCCAAGCGG CGGACCCGCG CGCAGATCGC CCGCGAGGCC
GGCCTGGAGC CCCTCGCCGA CACCCTGCTC GACGAGCCAG CCCAGGACCC GCGGGCGACG
GCCGCCGGGT TCGTCGACCC GGACCGGGGC ATCGCCGACG CCGCCGCCGC GCTCGACGGC
GCCCGAGCCA TCCTGGTCGA GCGGTTCGCC GAGGATGCCG ACCTGATCGG CACGCTGCGC
GAGCAGATGT GGTCCCGGGG CCGGCTGGTG TCCCGGGTAC GCGATGGCCA GGCGACGACG
GGCGCCAAGT TCGCCGACTA CTTCGACTTC GCCGAGCCGT ACCCGAAACT GCCCTCGCAC
CGGGTTCTCG CCGTATTCCG CGGGGAGAAG GAGGGCGTAC TCGACCTGAC GATGGAGCCG
GAGGAGGCCG CCGAGACGGT GGCCACCGGG CCGACCCGGT ATGAGGCGGC CATCGCCGCC
CGGTTCGGAG TCAGCGACCA GGGACGGCCA GCTGACCGCT GGCTCTCCGA CACGGTTCGC
TGGGCCTGGC GTACCCGGAT CCTCATCCAC CTCGGCGCGG ACCTGCGCCT GCGACTGTGG
CAGGCCGCCG AGACGGAGGC GGTACGAGTC TTCGCCACGA ACCTGCGGGA CCTGCTGCTG
GCCGCCCCGG CCGGCACCCG GGCGACGATG GGGCTGGATC CGGGCCTGCG TACCGGGGTG
AAGGTCGCCG TCGTTGACGC CACCGGCAAG GTGGTCGCCA CCGACACCAT CTACCCGCAC
GAACCACGCC GGCAGTGGGA CGCCTCGATC GAGACCCTCG CCCGGCTGGC CGCCGCGCAC
CAGGTGGAGT TGGTGGCGAT CGGTAACGGC ACCGCGAGCC GGGAGACCGA CCGACTGGCC
GGAGAGCTGA TCCGGCGCCA CCCCCACCTG AACCTCACCA AGCTCGTCGT CTCCGAGTCC
GGCGCCTCCG TCTACTCGGC GTCCGCCTAC GCCGCGCAGG AACTGCCGGG CCTGGACGTG
TCGCTGCGGG GAGCAGTCTC CATCGCGCGC CGTCTCCAGG ATCCCCTCGC CGAGCTGGTC
AAGATCGACC CACGCTCCAT CGGAGTTGGA CAGTACCAAC ACGACCTGTC CGAGGTGACC
TTGTCCCGGT CGCTCGACGC GGTCGTCGAG GACTGCGTCA ACGCGGTCGG GGTCGATGTC
AACACCGCCT CCGCACCGCT GCTGACCCGA GTCTCCGGCA TCGGCGCCGG GCTGGCGGAG
AACATCGTGC TGCACCGAGA CGCGAACGGG CCGTTCCGGA GCCGACGCGA CCTGCGGCAG
GTCCCCCGAC TCGGCCCGAA GGCGTTCGAG CAGTGCGCCG GCTTCCTGCG CATCCCCGGT
GGTGAGGACC CGCTGGACTC GTCCAGCGTG CATCCGGAGG CGTACCCGGT GGTGCGGCGG
ATCCTCGCCG CGGTCAAGCA GGAACTACCA GCGGTGATCG GCCGGAGTGC GGTCCTGCGC
GGGCTGCGGG CCACCGACTT CGTCGATGAC ACCTTCGGGC TTCCGACGGT CACCGACATC
CTCACCGAGT TGGAAAAGCC CGGCCGGGAC CCGCGGCCGG AGTTCCGCAC CGCCACCTTC
GCCGAGGGCG TCGAGACAAT CGCCGATCTG GTGCCCGGCC TCATCCTGGA GGGGGTGGTC
ACCAACGTGG CCGCCTTCGG CGCGTTCGTG GACATCGGTG TGCACCAGGA CGGCCTGGTG
CACGTCTCGG CGATGTCCCG CACCTTCGTC CGGGACCCGC ACGAGGTGGT GAAGTCCGGT
GACGTGGTGA AGGTCAGGGT CCTCGACGTG GACGTGCCGC GCAAACGCAT CTCGCTGACC
CTGCGCCTGG ACGATACCGA GGCCAGCCGC GGCGGCGGGC GGGGGCAGCA GGGGGACCGC
GGCGGCGACC GGGAAACCGG CGGCCGTTCC CAAGGCCGCG GCGGACAGGG CGGGCGCGGC
GGACAAAGCG GCCGCTCCCA AGGCCGCGGC GGGCAGAGCG GGCACGGCGG ACAGCCGCGG
TCGGGACGTG GGGGCGGGGC CCCGGCCAAC GATGCGATGG CAGATGCCCT ACGCCGCGCC
GGTCTCGCCT GA
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| Protein sequence | MTLSVSQRIA EELGVAERQV HAAVELLDGG ATVPFIARYR KEATGLLDDT QLRTLEERLR
YLRELDQRRA AILESIGSQG KLDEALTAQI MAADSKSRLE DIYLPYKPKR RTRAQIAREA
GLEPLADTLL DEPAQDPRAT AAGFVDPDRG IADAAAALDG ARAILVERFA EDADLIGTLR
EQMWSRGRLV SRVRDGQATT GAKFADYFDF AEPYPKLPSH RVLAVFRGEK EGVLDLTMEP
EEAAETVATG PTRYEAAIAA RFGVSDQGRP ADRWLSDTVR WAWRTRILIH LGADLRLRLW
QAAETEAVRV FATNLRDLLL AAPAGTRATM GLDPGLRTGV KVAVVDATGK VVATDTIYPH
EPRRQWDASI ETLARLAAAH QVELVAIGNG TASRETDRLA GELIRRHPHL NLTKLVVSES
GASVYSASAY AAQELPGLDV SLRGAVSIAR RLQDPLAELV KIDPRSIGVG QYQHDLSEVT
LSRSLDAVVE DCVNAVGVDV NTASAPLLTR VSGIGAGLAE NIVLHRDANG PFRSRRDLRQ
VPRLGPKAFE QCAGFLRIPG GEDPLDSSSV HPEAYPVVRR ILAAVKQELP AVIGRSAVLR
GLRATDFVDD TFGLPTVTDI LTELEKPGRD PRPEFRTATF AEGVETIADL VPGLILEGVV
TNVAAFGAFV DIGVHQDGLV HVSAMSRTFV RDPHEVVKSG DVVKVRVLDV DVPRKRISLT
LRLDDTEASR GGGRGQQGDR GGDRETGGRS QGRGGQGGRG GQSGRSQGRG GQSGHGGQPR
SGRGGGAPAN DAMADALRRA GLA
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