Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_1700 |
Symbol | |
ID | 5058159 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 1944661 |
End bp | 1945704 |
Gene Length | 1044 bp |
Protein Length | 347 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640473972 |
Product | hypothetical protein |
Protein accession | YP_001158542 |
Protein GI | 145594245 |
COG category | [S] Function unknown |
COG ID | [COG4850] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.174731 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.570475 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCACCGA CTTCCGCCGG CCAACTGGCC GTACCCCAAC TGCACCGGGC CGCGCGGATC GAGGACGCCG TACACCGGCT GGTCGAGCGG CGGCTGCGGC ACACCGGCTG GCGGGTCCAC ACCGTGGCCT ACCCGGGCTA CGGGGCCCCG GGTTGGGTCC GGGTGATGTG TCGGGTGCTG TTGGGGCGGC CGGACAACCG GCAGCGGGGC CGGCCGGAGA AGGTCCGGGG CTGGCGCAGC TTCGCCACCC TGCCGGCCAA GCACATCCGG GTGGACATCG AGTCGGGGGG AGAGCGGCAC GAGACGCGCA CCGACCGCAG CGGCTTCGTG GACACGATCG TGCCGGTCGA CCTGCCCCCC GGGTGGGGGT CGGTGCAGAT CCGAGTCCCG GAGGCCGAGC CGGTCCAGGC GCCGGTGCGG ATTCTCGACC CCCGGGTGCG CTTTGGGGTG ATCTCCGACG TTGACGACAC GGTCATGGTG ACCACGCTGC CCCGGCCCCT GCTGGCCGCC TGGAACACGT TCGTCCTGGA CGAGCACGCC CGGGCCGCGG TGCCCGGGAT GGCCGTGCTG TACGAGCGGC TGGTCACCGC CCACCCCGGT GCTCCGGTGT TCTACCTGTC CACCGGGGCC TGGAATGTGG CGCCGACTCT CACCCGGTTT CTGTCTCGGC ACCTCTACCC GGCCGGGCCG CTGCTGCTCA CCGACTGGGG CCCGACGGCG GACCGGTGGT TCCGCAGCGG CCGGGAACAC AAGCGGGCCA CCCTGACCCG ACTCGCCGCG GAGTTCCCTG ACGTGCGGTG GTTGCTGGTC GGCGACGATG GTCAGCACGA CCAGGAGATC TACCGGGAGT TCGCGGTGTC CTACCCGGGC AATGTCGCCG GGATCGCGAT TCGCCGGCTC TCCCCGACCC AGGCGATGCT CGCCGGCGCG TTGCCGCACT CGGCCAGCGA CAGCGTGTCG GCTCCGCCGG TGGGGCAGGA GTGGCTCTCC GCGCCGGACG GGGCCGGGCT GTGGCAACTG TTGCGGGAGG CGGGTCTGGT CTGA
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Protein sequence | MSPTSAGQLA VPQLHRAARI EDAVHRLVER RLRHTGWRVH TVAYPGYGAP GWVRVMCRVL LGRPDNRQRG RPEKVRGWRS FATLPAKHIR VDIESGGERH ETRTDRSGFV DTIVPVDLPP GWGSVQIRVP EAEPVQAPVR ILDPRVRFGV ISDVDDTVMV TTLPRPLLAA WNTFVLDEHA RAAVPGMAVL YERLVTAHPG APVFYLSTGA WNVAPTLTRF LSRHLYPAGP LLLTDWGPTA DRWFRSGREH KRATLTRLAA EFPDVRWLLV GDDGQHDQEI YREFAVSYPG NVAGIAIRRL SPTQAMLAGA LPHSASDSVS APPVGQEWLS APDGAGLWQL LREAGLV
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