Gene Strop_1700 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1700 
Symbol 
ID5058159 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1944661 
End bp1945704 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content73% 
IMG OID640473972 
Producthypothetical protein 
Protein accessionYP_001158542 
Protein GI145594245 
COG category[S] Function unknown 
COG ID[COG4850] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.174731 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.570475 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCACCGA CTTCCGCCGG CCAACTGGCC GTACCCCAAC TGCACCGGGC CGCGCGGATC 
GAGGACGCCG TACACCGGCT GGTCGAGCGG CGGCTGCGGC ACACCGGCTG GCGGGTCCAC
ACCGTGGCCT ACCCGGGCTA CGGGGCCCCG GGTTGGGTCC GGGTGATGTG TCGGGTGCTG
TTGGGGCGGC CGGACAACCG GCAGCGGGGC CGGCCGGAGA AGGTCCGGGG CTGGCGCAGC
TTCGCCACCC TGCCGGCCAA GCACATCCGG GTGGACATCG AGTCGGGGGG AGAGCGGCAC
GAGACGCGCA CCGACCGCAG CGGCTTCGTG GACACGATCG TGCCGGTCGA CCTGCCCCCC
GGGTGGGGGT CGGTGCAGAT CCGAGTCCCG GAGGCCGAGC CGGTCCAGGC GCCGGTGCGG
ATTCTCGACC CCCGGGTGCG CTTTGGGGTG ATCTCCGACG TTGACGACAC GGTCATGGTG
ACCACGCTGC CCCGGCCCCT GCTGGCCGCC TGGAACACGT TCGTCCTGGA CGAGCACGCC
CGGGCCGCGG TGCCCGGGAT GGCCGTGCTG TACGAGCGGC TGGTCACCGC CCACCCCGGT
GCTCCGGTGT TCTACCTGTC CACCGGGGCC TGGAATGTGG CGCCGACTCT CACCCGGTTT
CTGTCTCGGC ACCTCTACCC GGCCGGGCCG CTGCTGCTCA CCGACTGGGG CCCGACGGCG
GACCGGTGGT TCCGCAGCGG CCGGGAACAC AAGCGGGCCA CCCTGACCCG ACTCGCCGCG
GAGTTCCCTG ACGTGCGGTG GTTGCTGGTC GGCGACGATG GTCAGCACGA CCAGGAGATC
TACCGGGAGT TCGCGGTGTC CTACCCGGGC AATGTCGCCG GGATCGCGAT TCGCCGGCTC
TCCCCGACCC AGGCGATGCT CGCCGGCGCG TTGCCGCACT CGGCCAGCGA CAGCGTGTCG
GCTCCGCCGG TGGGGCAGGA GTGGCTCTCC GCGCCGGACG GGGCCGGGCT GTGGCAACTG
TTGCGGGAGG CGGGTCTGGT CTGA
 
Protein sequence
MSPTSAGQLA VPQLHRAARI EDAVHRLVER RLRHTGWRVH TVAYPGYGAP GWVRVMCRVL 
LGRPDNRQRG RPEKVRGWRS FATLPAKHIR VDIESGGERH ETRTDRSGFV DTIVPVDLPP
GWGSVQIRVP EAEPVQAPVR ILDPRVRFGV ISDVDDTVMV TTLPRPLLAA WNTFVLDEHA
RAAVPGMAVL YERLVTAHPG APVFYLSTGA WNVAPTLTRF LSRHLYPAGP LLLTDWGPTA
DRWFRSGREH KRATLTRLAA EFPDVRWLLV GDDGQHDQEI YREFAVSYPG NVAGIAIRRL
SPTQAMLAGA LPHSASDSVS APPVGQEWLS APDGAGLWQL LREAGLV