Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_1697 |
Symbol | |
ID | 5058156 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 1941088 |
End bp | 1942080 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640473969 |
Product | TRAP transporter solute receptor TAXI family protein |
Protein accession | YP_001158539 |
Protein GI | 145594242 |
COG category | [R] General function prediction only |
COG ID | [COG2358] TRAP-type uncharacterized transport system, periplasmic component |
TIGRFAM ID | [TIGR02122] TRAP transporter solute receptor, TAXI family |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.607751 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.828936 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGGGTT GCGCCCGGCC ACCTGCACGG CGCACAGTGC AGCCCGTGAT CAGAACCCCA GGTCGCCGAC GCGGCGCGGC GCTACCGGTG CTGCTCCTGG CGATGGCGCT GCCGGGTCTC ACCGGATGCC AGGACGCCTC TCCGCCAGCC GTGCAGATCC GCATCGCCAC CGGCAGTCCC ACCGCCGTCT ACTACGCCTT CGGGCAGTCA CTGGCCACCA TCCTCAACCG GGAGCTACCG AACGTTGCGG CTGAGGTGCG GGTGACCGCC GCCTCGGCGG AAAACATCCA ACTCGTCGAC GCGGGCGAAG CGGAACTCGG CTTCACCCAG GCCGACGCAC TCCCCGCCGT CCCGACCACG CCGCCGACGA TAGCCGCCGT GGCTCGCGTC TACGACGACC TCCTGCACCT CGTCACCACC CCGGCCAGCG GCGTCCGCAC CCTCGCCGAC CTGCGGGGCC GGCGGGTGTC CGTGGGGGCA CCCGGGTCCG GGACCGAGAT CACCACATCC CGCCTGCTCG ACGTGGCCCA GCTCGGCGAG GACGAGGTGC ACCGGGAGCG ACTCGGCCTG GACGACTCGG TCGAGGCACT GCGGGCGGGT CAGATCGACG CGTTCTTCTT CTCCGGCGGC CTACCAGTGG GGGCGGTAAC GACGCTGGCC GCACAACGGC GCGTCCAGCT GGTCGACCTC GGTGCGTGGA CCACGCCGCT TCGCGCCCAC CATCCCGGCT TCTACGTCTC CCGGGACATC CCCCGCTCGG TGTACGGAGT GGACCCGGTG ACCACCGTCG CGAACCCGAA CTACCTGATC GTCCGCGCCG ACCTACCGGA GGGACTGGTC CGGGAGCTGA CCCGGCTCCT CATGGAACGG CGCGAGGAAC TGGCGTCGGC GCACCCGGCA GCCGGTCAGA TGAGTCCACG CTCGGCCATC AACACCACGC CCCTGCCACT GCACCCCGGG TCGGTGGCCT GGTACAACGC GGTCAAACCG TAG
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Protein sequence | MRGCARPPAR RTVQPVIRTP GRRRGAALPV LLLAMALPGL TGCQDASPPA VQIRIATGSP TAVYYAFGQS LATILNRELP NVAAEVRVTA ASAENIQLVD AGEAELGFTQ ADALPAVPTT PPTIAAVARV YDDLLHLVTT PASGVRTLAD LRGRRVSVGA PGSGTEITTS RLLDVAQLGE DEVHRERLGL DDSVEALRAG QIDAFFFSGG LPVGAVTTLA AQRRVQLVDL GAWTTPLRAH HPGFYVSRDI PRSVYGVDPV TTVANPNYLI VRADLPEGLV RELTRLLMER REELASAHPA AGQMSPRSAI NTTPLPLHPG SVAWYNAVKP
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