| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1646 |
|---|
| Symbol | |
|---|
| ID | 5058105 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora tropica CNB-440 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009380 |
|---|
| Strand | - |
|---|
| Start bp | 1874793 |
|---|
| End bp | 1876376 |
|---|
| Gene Length | 1584 bp |
|---|
| Protein Length | 527 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640473919 |
|---|
| Product | sulphate transporter |
|---|
| Protein accession | YP_001158489 |
|---|
| Protein GI | 145594192 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0659] Sulfate permease and related transporters (MFS superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.0415983 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGTGTA CAACATTCGG CACGTCCCGA GTAGGACGTG CCGATCCGTG TGCGCCCCGT
GTACACCCGA GTGGAAACGG CTGTATGTCT CCTGTGCTGC CCGCGGTCAA CCGGCCGCGC
CTGTCCCGCC CGTCCTGGCT GTCACCGAAG GTACTTCGGA CCGAGGTGCT CGCCGGCCTG
GTCGTTGCCC TGGCGCTGAT CCCGGAGGCG ATCAGCTTCT CGATCCTCGC CGGGGTGGAC
CCCCGCGTCG GGCTGTTCGC CTCCTTCACC ATGGCCGTCG TCATCGCGAT CTGTGGCGGT
CGACCGGCGA TGATCTCCGC AGCGACCGGG GCGATCGCTT TGGTCGTGGC ACCGCTGGCG
AAAGAGCACG GGCTGGACTA CCTGATCGCC GCGGTGATCC TCGGCGGCAT CATCCAGGTG
CTACTGGCGC TGCTCGGGGT GGCGAAGCTG ATGCGGTTCA TCCCCCGCAG CGTGATGGTC
GGCTTCGTCA ACGCGCTGGC CATCCTCATC TTCTCCGCAC AGGTGCCGTA CCTGCTCGGG
GTGCCGTGGT TGGTCTACCC GCTGGTCGGC CTGGCCCTGG CGATCATGAT CGGGCTGCCC
CGGATCACCC GGGCCGTACC AGCCCCACTG GTGACGATCA TCGTCCTGAC CACCATCACG
GTCGCCGCCG GGATTGCCGT GCCCACCGTC GGCGACCAGG GCGAACTGCC CAACAACCTG
CCCACCCTCG GGCTGCCACA GATCCCCTGG ACCCTCGACA CCCTGAGCCT GATCGCTCCG
TACGCCCTCG GCGTGGCGCT GGTCGGGCTG ATGGAGTCGC TGATGACCGC CAAGCTGGTG
GACGACATCA CCGACACCCA CTCCAACAAG ACCCGCGAGT CCTGGGGCCA GGGCGTCGCC
AACATCGTCA CCGGCTTCTT CGGCGGTATG GGTGGCTGCG CGATGATCGG TCAAACGATG
ATCAACGTTA AGGCGTCTGG CGCGCGAACC CGGCTGTCGA CCTTCCTCTC CGGCGTGTTC
CTGCTCATCC TGGTGGTCAG CCTGGGCGAC GTGGTCGCCG CGATCCCGAT GGCCGGCCTG
GTCGCGGTTA TGATCATTGT CTCGGTCTCG ACGTTCGACT GGCACTCGGT GGCCCCGGCC
ACACTGAAGC GGATGCCCTG GGGCGAGACG CTGGTCATGG TCGCCACCGT CGCCACGACC
CTGTTCACCC ACAACCTGGC CATCGGTGTG GTCATCGGTG TCCTCACCGC GATGGTGATT
TTCGCCAACC GGGTCGCGCA CCTGGTGGAG GTCACCAGCG TGCTGGACCC CGACGGCGGG
AGCCGCATCT ACTCGGTGCA CGGCGAGTTG TTCTTCGCCG CCAGCAACGA TCTGGTCTAC
CAGTTCGACT ACGCCAACGA TCCGTCACAC GTGGTCATCG ACATGACCCA CGCCCACGTC
TGGGACGCCT CGTCGGTCGC GGCGCTGGAC GCCATCACCA CGAAGTACGC GGCGCGCGGC
AAGACCGTGG AGATCATCGA GCTGAACCAG CCCAGCGCCG CCATCCACGG CAACCTGGCC
GGCACCCTCG GCGAGGGCCA CTGA
|
|---|
| Protein sequence | MLCTTFGTSR VGRADPCAPR VHPSGNGCMS PVLPAVNRPR LSRPSWLSPK VLRTEVLAGL
VVALALIPEA ISFSILAGVD PRVGLFASFT MAVVIAICGG RPAMISAATG AIALVVAPLA
KEHGLDYLIA AVILGGIIQV LLALLGVAKL MRFIPRSVMV GFVNALAILI FSAQVPYLLG
VPWLVYPLVG LALAIMIGLP RITRAVPAPL VTIIVLTTIT VAAGIAVPTV GDQGELPNNL
PTLGLPQIPW TLDTLSLIAP YALGVALVGL MESLMTAKLV DDITDTHSNK TRESWGQGVA
NIVTGFFGGM GGCAMIGQTM INVKASGART RLSTFLSGVF LLILVVSLGD VVAAIPMAGL
VAVMIIVSVS TFDWHSVAPA TLKRMPWGET LVMVATVATT LFTHNLAIGV VIGVLTAMVI
FANRVAHLVE VTSVLDPDGG SRIYSVHGEL FFAASNDLVY QFDYANDPSH VVIDMTHAHV
WDASSVAALD AITTKYAARG KTVEIIELNQ PSAAIHGNLA GTLGEGH
|
|---|
| |