| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1641 |
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| Symbol | |
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| ID | 5058100 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 1869132 |
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| End bp | 1870211 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640473914 |
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| Product | glycine betaine/L-proline ABC transporter, ATPase subunit |
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| Protein accession | YP_001158484 |
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| Protein GI | 145594187 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4175] ABC-type proline/glycine betaine transport system, ATPase component |
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| TIGRFAM ID | [TIGR01186] glycine betaine/L-proline transport ATP binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.565907 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.509046 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACGG ATACGGCGGT TCAGCCGCGC GGGCAGGTCA ATGATCGCCA GACTCCGGTG
ATCTCGGTCC GGAACCTGTG GAAGGTGTTC GGCCCGAACG CGGAGCGGGT GCCGAGCTCG
ACCGAGCTCG CGGGGCTGTC CCGGCGGGAA CTGCGGGAGC GGGCCCGGTG TACCGCCGCG
GTACGGGAGG TGTCGTTCGA CGTCGCGCCG GGAGAGGTCT TCGTCGTGAT GGGGCTGTCC
GGCTCCGGCA AGTCCACGCT GGTGCGCTGC CTGACCCGGC TGATCGAGCC CACCGCGGGG
GAGGTGGTCT TCGAGGGCGA GGACATCCTG CGTGCCGACA AGAAGCGGCT GCGGGAGCTC
CGTCGCCGTA AGTTCTCGAT GGTCTTCCAG CACTTTGGTC TCCTGCCGTA CCGAACGGTC
GTCGACAACG TCGGGTATGG ACTGGAGATC CGGGGTGCCG GCCGCGCCGA GCGGATCCGC
CGGGCGACCG AGGTCATCGA GCTGGTGGGC CTCGACGGCT ACGAGCAGGC GTACCCGGAC
CAGCTCTCCG GCGGGATGCA GCAGCGGGTC GGGCTGGCGC GGGCGCTGGC CGGTGACCCG
GACGTGCTCT TCTTCGACGA GCCGTTCTCC GCGCTGGACC CGCTGATCCG CCGTGACATG
CAGAACGAGG TCATCCGACT GCACCGTCAG GTTGGTAAGA CGATGGTCTT CATCACGCAC
GACCTCTCCG AGGCGCTCAA ACTCGGCGAC CGGATCCTGC TCATGCGCGA CGGCAACGTG
GTGCAGGCCG GGACCGGGGA CGAGTTGGTC GGGGCGCCGG CCGACGACTA CGTGCGCGAC
TTCGTCCAGG ACGTGCCCCG CGCCGACGTT CTCACCCTGC GGTGGATCAT GCGTCCATCC
CGGGACGCCG ACCAGCTGGA CGGTCCTCAG CTGGGGCCGG GTGTCATCGT GCGCGACGCG
GTCCGCACGG TGCTCGCCGC CGACCGGCCG GTGCGGGTCG TCGAGAACGG GGAGCTGCTG
GGCGTGGTCG GCCATGAGGA AGTCCTCAAT ATTGTCGCCG GCACGCAGGC GGGCGCCTAA
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| Protein sequence | MSTDTAVQPR GQVNDRQTPV ISVRNLWKVF GPNAERVPSS TELAGLSRRE LRERARCTAA
VREVSFDVAP GEVFVVMGLS GSGKSTLVRC LTRLIEPTAG EVVFEGEDIL RADKKRLREL
RRRKFSMVFQ HFGLLPYRTV VDNVGYGLEI RGAGRAERIR RATEVIELVG LDGYEQAYPD
QLSGGMQQRV GLARALAGDP DVLFFDEPFS ALDPLIRRDM QNEVIRLHRQ VGKTMVFITH
DLSEALKLGD RILLMRDGNV VQAGTGDELV GAPADDYVRD FVQDVPRADV LTLRWIMRPS
RDADQLDGPQ LGPGVIVRDA VRTVLAADRP VRVVENGELL GVVGHEEVLN IVAGTQAGA
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