| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1635 |
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| Symbol | |
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| ID | 5058094 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 1860870 |
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| End bp | 1862063 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640473908 |
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| Product | glycine betaine/L-proline ABC transporter, ATPase subunit |
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| Protein accession | YP_001158478 |
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| Protein GI | 145594181 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1125] ABC-type proline/glycine betaine transport systems, ATPase components |
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| TIGRFAM ID | [TIGR01186] glycine betaine/L-proline transport ATP binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.839045 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCGCG ACGTAATGAT CGATCTGCAG CAGGTCAGCA AGTTCTACCG GGGACAGAAA
GCCCCGGTCG TCGAGAACAT GTCGATGACG ATCCAGCAGG GCGAGATCAT CGTCTTGGTC
GGCCCCTCCG GCTGCGGCAA GACCACGACC ATGAAAATGA TCAACCGGTT GATCGAGCCC
AGCAGCGGGC GGATCCTCAT CGACGGCACC GACGTAACCG CGCTGGACGG CAACGACCTG
CGCCGGCAGA TCGGCTACGT CATTCAGCAG GTCGGGCTCT TCCCCCACAT GAGCGTCGCC
ACCAATGTCG GGCTGGTGCC GAAGATGCTC GGCTGGGACC GCAAGCGGAT CGAGGCACGG
GCCGACGAAC TCCTCCACCT CGTCGGCCTC GATCCGGCCA TCTACCGCAA CCGGCTGCCC
CGCCAACTCT CCGGCGGGCA GCAGCAGCGC GTCGGGGTGG CCCGGGCGCT CGCCGCGGAT
CCGCCGGTGA TGCTGATGGA CGAGCCCTTC GGTGCCACCG ACCCGATGAC CCGGGACCGG
TTGCAGAACG AGTTCCTCCG CCTGCAGGAA CAGTTGCGCA AGACCATCGT CTTCGTCACG
CACGACTTCG ACGAGGCGAT CAAGATGGGG ACCCGAATCG CCGTCCTCGG GGAGAGGTCC
AAGATTCGGC AGTTCGACAC CCCGGAAAAC CTGCTGGCGA GTCCCGCCGA CAGCACCGTG
GCCCAGTTCA TCGGCCGCGG TGCCCGGCTC AAGCAGCTCG ACCTGCGCCG GGTCGACGCA
ATCCGTTGGG AGGACGTCCC GCTGATCCGG CTGGACAAGT CCAACGGCGC AAAGCGCCAG
CTTGACCAGG CCGAAGGCTC CGCGGCACTG ACCGTCGACG CCGACAATCG GCCGCTGCAC
TGGGTCAGTT CCCACGATCT GACCTCTCGC CCGGGCGTCC TTGACGACGC CGGCCAGGCG
GTGACGACAG TCGAGCCGGA GGCGACGCTT CGCGACGCCC TGGACGCGAT GCTCGCCTCC
CGCGACGGCG CAGCGGTCGT GGTCGACGAG CAGGGTCGCT ACGCCGGCAC GGTAACGCTG
GACGGCTTGA TGCAGGTGAT CCACCACACG CCAGAGGACG AGCCGGGTTC CGGGGTTCCC
GACCAGCGTT CGGGCGTGGC AACCGCCGCC GAGCTAACCC CTGAGCAGCG ATGA
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| Protein sequence | MNRDVMIDLQ QVSKFYRGQK APVVENMSMT IQQGEIIVLV GPSGCGKTTT MKMINRLIEP
SSGRILIDGT DVTALDGNDL RRQIGYVIQQ VGLFPHMSVA TNVGLVPKML GWDRKRIEAR
ADELLHLVGL DPAIYRNRLP RQLSGGQQQR VGVARALAAD PPVMLMDEPF GATDPMTRDR
LQNEFLRLQE QLRKTIVFVT HDFDEAIKMG TRIAVLGERS KIRQFDTPEN LLASPADSTV
AQFIGRGARL KQLDLRRVDA IRWEDVPLIR LDKSNGAKRQ LDQAEGSAAL TVDADNRPLH
WVSSHDLTSR PGVLDDAGQA VTTVEPEATL RDALDAMLAS RDGAAVVVDE QGRYAGTVTL
DGLMQVIHHT PEDEPGSGVP DQRSGVATAA ELTPEQR
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