Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_1628 |
Symbol | |
ID | 5058087 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 1851833 |
End bp | 1852639 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640473901 |
Product | ABC transporter related |
Protein accession | YP_001158471 |
Protein GI | 145594174 |
COG category | [H] Coenzyme transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0337589 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.368888 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTCCC CACCCGCTCT CGAGGCAGCC CGCCTGACGC TCGCGTACGA GTCACGTCAG GTCGCTCACG ATCTTGACGT CTCCATCCCG GACGGCGCGG TAACCGTGAT CCTCGGCCCG AACGCGTGCG GCAAGTCGAC GCTGCTACGG GCGCTCGCGC GACTGCTCCG CCCCAGGACC GGCCAGGTAC TGCTCCACGG CCAGGACGTA CAGCGGCTGG CCCCGAAGGA ACTGGCCCGC CGACTCGGGC TGCTACCGCA GTCCTCCGTG GCGCCGGCCG GCATCACCGT CGCCGACCTC GTCGGCCGTG GCCGCTTCCC GCACCAACGA ATGTTGCAGC AGTGGAGCCA CGAGGACGAA GCGGCGGTGG CCCGGGCGCT CGCGGCGACC GGGGTGGCGG AGCTGGCGGA CCGGACCGTC GAGGAGTTGT CCGGCGGCCA ACGACAGCGG GTGTGGATCG CACTGATCCT CGCCCAGGAG ACGCCGGTGC TACTCCTGGA CGAACCCACC ACCTACCTCG ATATCTCACA CCAGCTCGAG GTGCTCGAAC TGTGCCGACG GCTCAACCGC GACCAGGGGC GCACCGTGGT CCTGGTGCTG CACGACCTCA ATCAGGCAGC ACGCTACGCC GACCATCTCG TGGTGCTGCA CGACGGCGCG GTGGCGGCCA CCGGCGCCCC GCACACGGTG CTCACCGAGC AGTTGCTGCA CGACGTCTTC CGGCTGAAGG CCCGCGTCGT CACCGACCCG GTGTTCGGCA CACCGCTGGT CATCCCGATC GCCGCTCGGA ACACCGCCGC CGCGTGA
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Protein sequence | MTSPPALEAA RLTLAYESRQ VAHDLDVSIP DGAVTVILGP NACGKSTLLR ALARLLRPRT GQVLLHGQDV QRLAPKELAR RLGLLPQSSV APAGITVADL VGRGRFPHQR MLQQWSHEDE AAVARALAAT GVAELADRTV EELSGGQRQR VWIALILAQE TPVLLLDEPT TYLDISHQLE VLELCRRLNR DQGRTVVLVL HDLNQAARYA DHLVVLHDGA VAATGAPHTV LTEQLLHDVF RLKARVVTDP VFGTPLVIPI AARNTAAA
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