| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1620 |
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| Symbol | |
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| ID | 5058079 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 1841135 |
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| End bp | 1842382 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640473893 |
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| Product | polymorphic membrane protein |
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| Protein accession | YP_001158463 |
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| Protein GI | 145594166 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01376] Chlamydial polymorphic outer membrane protein repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.890418 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGGCC TGGCGTTCAC CACTGCCGCT GTGGCCACTG CCGCTTATGC CCAACCGAAC
CAGCCCGCAC CGAGCTTCAC CACCGCGACC GACACGGACC TCCGCGACCG GGCAACCGAG
AGCGGCCGGA ACGGAGGCGG CACTCCCGTC GCGTGTGACG CGGATGCCCT GATTGCCGCG
ATCACGTCCG CCAACGCCAC CGGCGGCGGT GTGTTCGACC TGGCCAAGGA CTGCACCTAC
CTGCTTACTT TCGATATTGG TGGGGCCGGT CTGCCCGCGG TCACCGCCCC GATCACGCTT
AATGGCGGTA AGAACACCAC CATCGAACGC GCCGCCGCCG CAGACCAGTT CCGCATCCTC
ACCGTCGGCA CCGGCGGCAA CCTCACCCTC AACCATCTGA AGATCACCGG TGGCCAGACC
ACCGCGGCGG GTACCGACGG GGGCGGCATC CTCGTCAACA CGGGCGGCGG GCTGGCGGTC
AACCACAGCG CTGTCACGAG CAACATCGCC GGCGGCAATG GTGGCGGTAT CGCCAACAAC
GGCGTCACCA CCGTCAAGCG CTCCACCGTC AGCCGCAACA CCGCCCGACT GGAAGGGGGC
GGCATCTACA GCACGGGCGC GCTGACCGTC GGCCGGTCTG AGGTGGAGGC GAACACCGGT
ACCGCCGGAG GAGGTGGCAT CGCGAGCATG GGAGGAACGG TCGAGGTCGC CAAGAGTTCC
CTCTCCGGCA ACTGGTCCAA TCAGGGGGCC GGTCTCTTCA TCGTGGATAG CGGAATCGGC
TCGGTTACCG ACACCCATAT CACGAAGAAT TCCGCTGCCG ATGTTGGTGG GGGTGTCTTC
ATTCTGGGGC AGCTGACGAT GCAGAAGGTT GTCCTTGCCG GCAACACCGC CGAAACCGGT
GCCGGCCTCA GTGTCGTCAA CGGCTCCACG GCCGACATCA TGGACAGCGC CATCGTCGAC
AACACTGCCG GTGCACAGGG CGGCGGCATC TTTAACGCTG GTATGACCAC GCTGAACAAC
ACCAAGCTCG ACGGTAACCA GGCCGACATG GGCGGTGGTG TCCAGAACCT CGCAGCAGCG
ACGCTGACCT TCTTCGCCTC GACGGTCACC GACAATCTCG CCGTGACCGA CGGCGGGGGA
ATTTTCAACG AGGTAGGCGG GACCGTCACC CTGAATACGG CTACCGGCAC CACCGTTATC
GGTAACCGTC CGAACAACTG TGTGAATGTT CCCGGCTGCG CCGGGTAG
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| Protein sequence | MTGLAFTTAA VATAAYAQPN QPAPSFTTAT DTDLRDRATE SGRNGGGTPV ACDADALIAA
ITSANATGGG VFDLAKDCTY LLTFDIGGAG LPAVTAPITL NGGKNTTIER AAAADQFRIL
TVGTGGNLTL NHLKITGGQT TAAGTDGGGI LVNTGGGLAV NHSAVTSNIA GGNGGGIANN
GVTTVKRSTV SRNTARLEGG GIYSTGALTV GRSEVEANTG TAGGGGIASM GGTVEVAKSS
LSGNWSNQGA GLFIVDSGIG SVTDTHITKN SAADVGGGVF ILGQLTMQKV VLAGNTAETG
AGLSVVNGST ADIMDSAIVD NTAGAQGGGI FNAGMTTLNN TKLDGNQADM GGGVQNLAAA
TLTFFASTVT DNLAVTDGGG IFNEVGGTVT LNTATGTTVI GNRPNNCVNV PGCAG
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