Gene Strop_1608 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1608 
Symbol 
ID5058067 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1827909 
End bp1829036 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content67% 
IMG OID640473881 
Producthypothetical protein 
Protein accessionYP_001158451 
Protein GI145594154 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.138638 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGGTC GCGGACGATC AGCACCACAG CGCGGCGAGG TGACTGGCTA CCTTCTCAAG 
CTGATCCGGG AGTCCATCCC GCTGACGCAG GAGCAACTCG CCACCGATCT GGACGTGGAC
CGAGTGACCG TGCAGAGCTG GGAGTCCGGA CGTCGTCCAT TTGCGGCGAT GCCGCTCGGG
CAGGCAATCG CCGTCCGGCG CAGACTCGGA CGGCTCGGAG CGAACGTGAC CCTTCTCGCC
GCACTCGACG ACGCCGCCGA GGCAGACTTC ATCCTCACCG CGGTCCTCAA CGGGCAGGCG
GACCGCAACG ACATCGCTGA ACAGCCACTC GGCTGGTCCG TCCTCACCCA CCGGCTGACC
GACCTGATCC TCTGGGCTGT TCTCGGGCAA ACACCGACCT TCGCCAGAGG GCTAGCCGTC
ACCCACGCCC GGCGAGGTCC GGTGGCCTCG GGACCAACCC TGCCCACCGA CGAGCAACGC
TTGTTCTTCG CCCGGCTTCA CTTGCTCGCC GAACGCGCAG CCGCCGAACG CGACCCAAAC
GTTCTGCTGC ACCGGCAAGC CTGCTTCCTC GCGGGCATGG ACCCCACCAG GACAGCCGCA
GCATGGCTCG CTCAGACCAC CACCCGCGCC CGCAGGACGA TCACGTTCCG CACCTGGTCA
CCGCTGTGGC CCGACGCCCG CTCCGTCGTC ACATCCCTGG CCAACCAGGG CGACCCGGAG
CCGTTGCGGG ACTTCCTCGC CCACGCACAC CCGGACGATA CCTGCCAGCG AGCCGCCCTC
AACTACTCGG CCTACTGGGT CGGGGAGATC CCGTACCGCC AGTGCGACGA CTCCTTCATG
CCCGCACCGC TCACAGACTG GCACGGCTCG GTTCTCTTCC GGCACCTGGT CCAACGCCTC
AATTCAACGC ACCCCCTTAT CGACCTCAAC ATCCACAACA TCTGGGCGCT GCTAGCCGTG
CGACGCGGCC TCCCTCTGGG CAACCCCGCC GAGGGCCGCA TGCTCCTCGA TCGCAGCACC
CGAATCCTGG ACAGCGACCG CATCTGTCCG CAATCCCGAC AGGAACTAAC CTCTATCGTC
TACAGCCTGC GCGCAGACGG AATCACCGGC ACAGGGACGG ACAGATGA
 
Protein sequence
MAGRGRSAPQ RGEVTGYLLK LIRESIPLTQ EQLATDLDVD RVTVQSWESG RRPFAAMPLG 
QAIAVRRRLG RLGANVTLLA ALDDAAEADF ILTAVLNGQA DRNDIAEQPL GWSVLTHRLT
DLILWAVLGQ TPTFARGLAV THARRGPVAS GPTLPTDEQR LFFARLHLLA ERAAAERDPN
VLLHRQACFL AGMDPTRTAA AWLAQTTTRA RRTITFRTWS PLWPDARSVV TSLANQGDPE
PLRDFLAHAH PDDTCQRAAL NYSAYWVGEI PYRQCDDSFM PAPLTDWHGS VLFRHLVQRL
NSTHPLIDLN IHNIWALLAV RRGLPLGNPA EGRMLLDRST RILDSDRICP QSRQELTSIV
YSLRADGITG TGTDR