Gene Strop_1579 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1579 
Symbol 
ID5058037 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1794551 
End bp1795699 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content73% 
IMG OID640473852 
Producthypothetical protein 
Protein accessionYP_001158423 
Protein GI145594126 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.579245 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCCGTG CATCGCATAA CCCATCGGGT CGAATGGTCC GGCGGCGACA GGACCTGCGC 
CCCGTGCGTT CGGCCGGCGA ATATCGCAGG ATGGATCGGC AACCGCGCCC GGGTGCCCTC
CGGGTGCGGC ACGATGTGTT CGAGGGAAGG GTCGAGAGCA TGAGCCAGAC GGACCACGCG
CTGACCACCG CGCTCGCGCA GGCTGCCGCG ACCGCCGGTC GCGCCCCCTC GGTGCACAAC
ACCCAACCGT GGCGGTGGCG GGTCCTGCCC GACACGCTGG AGCTGCGCGT GGTCCGCGAC
CGGCAGCTCA CCGCCACCGA CCCGGAGGGG CGGCTGCTCA TCCTGAGCTG CGGCGCGGCG
CTGCACCACG CCCGGGTCGC GCTGGCCGCC GAGGGGTGGC AGGCGGTGGT TGAGCGCATC
CCCGATCCCG GCGACGAGGA CCTGCTGGCC CGGCTCACCG GCCTGACCCG GGTGGGGGCG
GATCCCGAGG CGATGCACCT GGTGCAGTGC ATGCGGATCC GACACACCGA CCGCCGACCG
GTCGGCGACG AACCGGTCAC CGACTCGGCC CTCACCGAGA TCACCGAGGC GGCAACCGCC
GAAGGGGTCC GGCTCCAGCA ACTCGACCGG GACCAGGTGT TGCAGCTGGC GACCGCCGCG
TCTCAGGCCG ACACGGTGGA GTCGGAGGAC CCCCAGCTGC GCACGGAGCT GGCGTACTGG
ACCAGCCGGG CCGACGATGT CGGCCTGCCG GCGGCGGTGT TGCCGGAATC GCCCCCACAG
ACCACCGTGC CCGGCCGGGA CTTCGGTCGG GCCGGCACGC TGCCCGTGGG GCCCGGTCAC
GACCAGGCAG CCGGATACGC GCTGCTCTAC GGCGACGAAG ACGAGCCCAT CACCTGGTTG
CGGGCCGGCG AGGCACTGTC GGCGGGTTGG CTCACGGCGA CCCGGCTGGG CGTCTCGATG
GTGCCGTTGA GCGGAGTGAT CGAGGTGCCG AGTACCCGCG CGGAGTTGCG CGGGGTACTG
GCCGGCATGG GGTACCCGTA TCTCGTGCTG CGCCTGGGGC GCGCGGACCC GACGCACGCC
GGCCCGCCGC ACACGCCGCG GCTCGCCATG GAACAGGTGG TGGACACCTC GGCGGTCCGC
GACACCTGA
 
Protein sequence
MGRASHNPSG RMVRRRQDLR PVRSAGEYRR MDRQPRPGAL RVRHDVFEGR VESMSQTDHA 
LTTALAQAAA TAGRAPSVHN TQPWRWRVLP DTLELRVVRD RQLTATDPEG RLLILSCGAA
LHHARVALAA EGWQAVVERI PDPGDEDLLA RLTGLTRVGA DPEAMHLVQC MRIRHTDRRP
VGDEPVTDSA LTEITEAATA EGVRLQQLDR DQVLQLATAA SQADTVESED PQLRTELAYW
TSRADDVGLP AAVLPESPPQ TTVPGRDFGR AGTLPVGPGH DQAAGYALLY GDEDEPITWL
RAGEALSAGW LTATRLGVSM VPLSGVIEVP STRAELRGVL AGMGYPYLVL RLGRADPTHA
GPPHTPRLAM EQVVDTSAVR DT