Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_1556 |
Symbol | |
ID | 5058009 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 1768451 |
End bp | 1768996 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640473824 |
Product | plasmid pRiA4b ORF-3 family protein |
Protein accession | YP_001158400 |
Protein GI | 145594103 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.568333 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCGTC AGATCTTCCA GCTGAGGATT TCCCTGGCCG GGGTCCGGCC GCTGGTCTGG CGCCGGGTGC TGGTCCCGGG TGGCTTCACC CTCGACCGGG TGCACCGGGT GGTGCAGCAC GCGATGGGTT GGCGGGACTG CCACCTGCAC TCGTTCGAGA TCGACGGCGA GCAGTACGGG GAACCCGACC CGGACGGCGA GCTGTCGCTC CGCGACGAGT TGGACGTGCG GCTGGACGCG GTGGTCGGTA AGGGTAGTCG CTTCCACTAC ACCTACGACT TCGGCGACTG GTGGGAGCAT GATCTGGTGG TGGAGGACGT CCTCCTCGCC GATCCGGAGG AGCGCTATCC CGCCTGTCCG GGTGGGGATC GGGCGTGCCC GCCGGAGGAT GTCGGTGGCC CGGCTGGCTA CCAGGCGCTG CTGGCTGCGT TGGCCGACCC GAGGCATCCG GAGCACCACA CGTTGCGTGA CTGGGCGGGT GACCGCTTCG ATCCGGCGGC CTTCGAGGCG GGTCGGGTGG GCACGCTGCT TCGCCGATTC TGCTGA
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Protein sequence | MPRQIFQLRI SLAGVRPLVW RRVLVPGGFT LDRVHRVVQH AMGWRDCHLH SFEIDGEQYG EPDPDGELSL RDELDVRLDA VVGKGSRFHY TYDFGDWWEH DLVVEDVLLA DPEERYPACP GGDRACPPED VGGPAGYQAL LAALADPRHP EHHTLRDWAG DRFDPAAFEA GRVGTLLRRF C
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