Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_1518 |
Symbol | |
ID | 5057971 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | - |
Start bp | 1726760 |
End bp | 1727596 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640473786 |
Product | helix-turn-helix domain-containing protein |
Protein accession | YP_001158362 |
Protein GI | 145594065 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.606963 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.022428 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGCGA GCCCGACTGT CCGTCGTCGA CGTTTGGCCG CTGCACTGCG CCGCCTTCGC GAGCAGACGG GCATGACCGC CGACCAGGCC GCCAAAGAGG TTGGCATCTC GAAGTCCGCG CTCAGCCGGA TCGAGAACGC CCAGGTCTCG GTGATGCCGC CGGTCGCCCG TGGCCTCCTT GAGCTGTACG GCGTCGAGGG CGAGGAGATT GACGCGCTCG TCCAGATCGC GCGGGACGCC CGCAAGCGCG GCTGGTGGCA GGCGTACGAC GATGTGCTGC CGGACTGGTT CGGGGTCTAC GTCGGGCTGG AAGCCGAAGC GTCGGAGGTC CGCGCCTTCG AGCCGCAGCT GATTCCCGGG CTACTCCAGA CCGCCGACTA CGCCCGCGCC GTCATCCGTG CGGAACACCC GGACTCCTCC AACGAGGAGG TGGACCGTCG GGTGGAGTTG CGGATGCGCC GCCAGGAGTC CAACAATTCG CCGAAGCTCT GGGTGGTGCT GGACGAGGCG ACGCTACGGC GACCTGTCGG TGGCGTCGAC ACCTTCCGCG CCCAGCTACG GAGACTGATC GAGGAGTCAG ACCGACCCGG CAACACCGTG CAAATCTTGA CCTTCGGTGC CGGCGAATAC GGTTCGATGG GCAGCGCGTT CAGCGTGCTG AGCTTCCCGG AGTTAGCGGA CTCGGGGGTC GTCTACGTCG AAACGCGAGC GGGTAGCCTC TATCTCGAAG GCCATCAGGT CAGGGAGTAT AGCCGGGTCT TCGAGCACCT GGTCGCCACG GCAGCCAGCG CTCGTGAGTC CCGCGACCTG ATCCAGGAGG CGATCGACGA GCGGTGA
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Protein sequence | MTASPTVRRR RLAAALRRLR EQTGMTADQA AKEVGISKSA LSRIENAQVS VMPPVARGLL ELYGVEGEEI DALVQIARDA RKRGWWQAYD DVLPDWFGVY VGLEAEASEV RAFEPQLIPG LLQTADYARA VIRAEHPDSS NEEVDRRVEL RMRRQESNNS PKLWVVLDEA TLRRPVGGVD TFRAQLRRLI EESDRPGNTV QILTFGAGEY GSMGSAFSVL SFPELADSGV VYVETRAGSL YLEGHQVREY SRVFEHLVAT AASARESRDL IQEAIDER
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