Gene Strop_1452 details

Gene Information

• Locus tag: Strop_1452
• Symbol: nrdR
• ID: 5057905
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Salinispora tropica CNB-440
• Kingdom: Bacteria
• Replicon accession: NC_009380
• Strand: +
• Start bp: 1653174
• End bp: 1653638
• Gene Length: 465 bp
• Protein Length: 154 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 640473720
• Product: transcriptional regulator NrdR
• Protein accession: YP_001158296
• Protein GI: 145593999
• COG category: [K] Transcription
• COG ID: [COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains
• TIGRFAM ID: [TIGR00244] transcriptional regulator NrdR

Plasmid Coverage information

• Num covering plasmid clones: 32
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 16
• Fosmid unclonability p-value: 0.711361
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCGGTGTC CGTACTGCCG CCACCCCGAC TCCCGGGTCG TCGACTCTCG GGAAGCCGAC 
GACGGCCAGC TGATCCGTCG ACGGCGGTCC TGCCCGGAGT GCGGCAAACG GTTTACCACG 
GTGGAGGAGG CGATTCTCGC GGTCGTCAAA CGTAGCGGGG TCACCGAACC CTTCAGCCGC 
ACGAAGATTA TTGGCGGGGT GCGCAAGGCG TGTCAGGGCC GGCCGGTTGA CGACGACTCC 
GTCGCCCTGC TGGCGCAGAA GGTCGAGGAG ACCGTGCGGG CCAAGGGCGC TGCCGAGCTC 
CCCAGCCATG AGGTGGGGCT GGCCATTCTG GGGCCGCTGC GGGACCTGGA CGAGGTGGCC 
TACCTCCGGT TTGCCAGCGT CTACCGGTCG TTCGAGTCAC TCGCCGACTT CGAGCGGGAG 
ATCGAGACGT TGCGGACCGC GGCCCAGGCC CGCGAGGGAG GCTGA 

 

Protein sequence

MRCPYCRHPD SRVVDSREAD DGQLIRRRRS CPECGKRFTT VEEAILAVVK RSGVTEPFSR 
TKIIGGVRKA CQGRPVDDDS VALLAQKVEE TVRAKGAAEL PSHEVGLAIL GPLRDLDEVA 
YLRFASVYRS FESLADFERE IETLRTAAQA REGG