| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1442 |
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| Symbol | |
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| ID | 5057895 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 1639752 |
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| End bp | 1641251 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640473710 |
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| Product | (dimethylallyl)adenosine tRNA methylthiotransferase |
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| Protein accession | YP_001158286 |
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| Protein GI | 145593989 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.557459 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTACCG CAGCGGCGAG CAGCCCGCGC ACCTACCAGG TGCGCACCTA CGGCTGCCAG
ATGAACGTGC ACGACTCCGA GCGCATCGCC GGGCTTCTTG AGCAGGCCGG CTACCTGCGG
GCCGGGGCCG CCGACGACAC CCCGGACGTG GTCGTCTTCA ACACCTGCGC CGTGCGGGAG
AACGCCGACA ACCGGCTCTA CGGCAATCTC GGCCAGCTGC GTCCCCGCAA GGACCAGCAC
CCGGAGATGC AGATCGCCGT GGGTGGCTGC CTGGCCCAGA AGGACCGCAG CGAGATCGTC
CGTCGGGCAC CCTGGGTCGA CGTCGTCTTC GGCACGCACA ACATCGGGTC GTTGCCGGTG
CTGTTGGAGC GGGCCCGGCA CAACGCCGCC GCCGAGGTGG AGATCCTGGA GTCCCTCGAG
GTCTTCCCGA GCACCCTGCC GACGCGTCGG GAGTCAACCT ACGCCGGTTG GGTGTCGATC
TCGGTCGGCT GTAACAACAC CTGCACGTTC TGCATCGTGC CGGCGCTGCG CGGAAAGGAG
AAGGACCGCC GCCCCGGCGA GATCCTCTCC GAGGTGCGAT CCCTGGTCGA CGAGGGTGTG
CTGGAGGTGA CCCTGCTCGG GCAGAACGTC AACTCCTACG GCATCGAGTT CGGTGACCGG
TACGCCTTCG GCAAGCTGCT GCGCGCCTGT GGCGACATCG ACGGTCTGGA GCGGGTGCGG
TTCACCAGCC CACACCCGAA GGACTTTACC GACGACGTGA TCGCCGCGAT GGCCGAGACA
CCGAACGTCT GCCCCTCGCT GCACATGCCG CTGCAGTCCG GCTCCGACGA CATGCTGCGG
GCCATGCGAC GCTCGTACCG GTCGGAGCGG TACCTGGGCA TCATCGAGAA GGTGCGGGCG
GCGATGCCGG ACGCGGCGAT CACCACGGAC ATCATCGTGG GCTTCCCCGG CGAGACCGAG
GCGGACTTCG AACGCACCCT CGACGTGGTC CGCGCGGCGC GGTTCTCCTC AGCGTTCACC
TTCCAGTACT CCAAGCGTCC CGGCACCCCC GCCGCGACGA TGGCTGATCA GCTGCCAAAA
GCGGTGGTGC AGGAGCGCTA CGAGCGGCTG ATCGACTGCG TCGAAGAGAT CACCTGGGCG
GAGAACCGGC GGCTGCTGGG GAAGACCGTC GAGGTGCTGG TGGCCGTCGG TGAGGGGCGT
AAGGACGAGC GCACCGGCCG GCTGTCCGGG CGGGCCCGCG ACGGCCGGCT GGTGCACTTC
GACGCCGGCA GCCTCGCCGG GCAGGTCCGC CCCGGGGACA TCGTGCAGAC CGTCGTCACC
TACGCCGCCC CTCACCACCT CAACGCCGAC GGTGAGCCGC TCGCGCACCG GCGTACCCGG
GCCGGCGACG CGGCCGAGGC GGGGCAGCGA CCTCGTACGG CTGGGGTGTC GCTCGGGTTG
CCCACGGTCG GCGCTCCGCC GCCGATGCCC CCCGCGGCCT CGTCCGCCTG CTCCTGCTGA
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| Protein sequence | MTTAAASSPR TYQVRTYGCQ MNVHDSERIA GLLEQAGYLR AGAADDTPDV VVFNTCAVRE
NADNRLYGNL GQLRPRKDQH PEMQIAVGGC LAQKDRSEIV RRAPWVDVVF GTHNIGSLPV
LLERARHNAA AEVEILESLE VFPSTLPTRR ESTYAGWVSI SVGCNNTCTF CIVPALRGKE
KDRRPGEILS EVRSLVDEGV LEVTLLGQNV NSYGIEFGDR YAFGKLLRAC GDIDGLERVR
FTSPHPKDFT DDVIAAMAET PNVCPSLHMP LQSGSDDMLR AMRRSYRSER YLGIIEKVRA
AMPDAAITTD IIVGFPGETE ADFERTLDVV RAARFSSAFT FQYSKRPGTP AATMADQLPK
AVVQERYERL IDCVEEITWA ENRRLLGKTV EVLVAVGEGR KDERTGRLSG RARDGRLVHF
DAGSLAGQVR PGDIVQTVVT YAAPHHLNAD GEPLAHRRTR AGDAAEAGQR PRTAGVSLGL
PTVGAPPPMP PAASSACSC
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