Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Strop_1368 |
Symbol | nusA |
ID | 5057821 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora tropica CNB-440 |
Kingdom | Bacteria |
Replicon accession | NC_009380 |
Strand | + |
Start bp | 1536598 |
End bp | 1537641 |
Gene Length | 1044 bp |
Protein Length | 347 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640473637 |
Product | transcription elongation factor NusA |
Protein accession | YP_001158213 |
Protein GI | 145593916 |
COG category | [K] Transcription |
COG ID | [COG0195] Transcription elongation factor |
TIGRFAM ID | [TIGR01953] transcription termination factor NusA |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.219498 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.327685 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAACATCG ACCTCGCGGC GCTGCGCGCA CTGGAGCGTG AGCGGGAAAT CCCGTTCGAC ACGATCCTCG CGGCGATTGA GACCGCGTTG CTGACGGCGT ACCGGCACAC CGAGGGTGCT CAGCCGCACG CACGGGTGGA GATCGACCGT AAGACGGGCG CGGCCCTGGT TTTCGCCCAG GAGGTGGAGC CCGACGGCGG TGTGGTGCGG GAGTGGGACG ACACGCCGCA CGACTTCGGT CGGATCGCGG CGATGACCGC CAAGCAGGTG ATTCTTCAGC GGCTGCGGGA GGCCACCGAC GAGGTGCACT TCGGTGAGTA CGTGGGTCGT GATGGGGACC TGGTGACCGG GGTGGTCCAG GCGCACGAGG CGCGTGCCGA GAAGGGCATC GTCAGTGTGG ACCTTGGCAA GCTGGAAGGG GTGCTGCCCC AGTCCGAGCA GGTCCCCGGT GAGCAGTACG CACACGGCGA GCGGGTGCGC TGCGTCGTGG TGCACGTGGC CAAGGGCGTA CGGGGTCCGC AGGTGACCCT GTCCCGCTCA CACCCGGCGT TGGTGAAGAA GCTCTTTGCC CTCGAGGTGC CGGAGATCGC CGACGGCACG GTGGAGATCA CCGCGATCGC CCGGGAGGCA GGTCACCGTA CGAAGATCGC TGTCCGCTCC ACCGCGGCGG GGGTGAACGC CAAGGGTGCC TGTATCGGGC CGATGGGTCA GCGGGTGCGG GCGGTCATGG GCGAGCTGCA CGGGGAAAAG ATCGACATTA TCGACTGGTC GGAGGATCCG GCTGCCTTCG TCGGTAACGC ACTCTCGCCG GCCAAGGCCC TCCGGGTGGA GGTGGTCGAC CTGGCTTCCC GTACCGCCCG GGTGACGGTG CCGGATTTCC AGCTTTCGCT GGCTATCGGA CGGGAAGGGC AGAATGCTCG ACTTGCCGCC CGATTGACCG GTTGGCGGAT CGACATCCGC TCCGACGCCG AGCCGGCCCG CCCGGCGGGC AATGCCGAAG CCGATCACGT CCCGGAGCCG GGCCGCGCGA TCTCCGGGGG CTAG
|
Protein sequence | MNIDLAALRA LEREREIPFD TILAAIETAL LTAYRHTEGA QPHARVEIDR KTGAALVFAQ EVEPDGGVVR EWDDTPHDFG RIAAMTAKQV ILQRLREATD EVHFGEYVGR DGDLVTGVVQ AHEARAEKGI VSVDLGKLEG VLPQSEQVPG EQYAHGERVR CVVVHVAKGV RGPQVTLSRS HPALVKKLFA LEVPEIADGT VEITAIAREA GHRTKIAVRS TAAGVNAKGA CIGPMGQRVR AVMGELHGEK IDIIDWSEDP AAFVGNALSP AKALRVEVVD LASRTARVTV PDFQLSLAIG REGQNARLAA RLTGWRIDIR SDAEPARPAG NAEADHVPEP GRAISGG
|
| |