| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1336 |
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| Symbol | |
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| ID | 5057789 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | - |
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| Start bp | 1502346 |
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| End bp | 1503023 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640473606 |
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| Product | helix-turn-helix domain-containing protein |
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| Protein accession | YP_001158182 |
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| Protein GI | 145593885 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4683] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCCCCG ACGAGTGGGA GATCTACCTC GTCAACGAGG TACAGGAGTG GATGGACGGC
CTCGATCCCC TCACCCACGC CCGTGTCGTG CAAGCCATCG ACCTACTCGC CGAAGCCGGC
CCAGGACTCG GCCGGCCACT GGTCGACACG ATCCACGGCT CGGCCCTCGC TAACCTCAAA
GAGCTACGCC CCGCCACCGT CCGCATCCTG TTCGCCTTTG ACCCGTGGCG CTCCAGCATC
CTGCTCGTCG CCGGAGACAA AGCTGGACGA TGGCAACAGT GGTACACCCC AAGCGATCCC
CCTGGCCGAG CAACGCTACG AGATCTACCT CAAGGAACGC GCCAAGGAGG ACCGACAACC
ATGAACAGCT ACACACGCTG GAGCGACATC CGCACCACCC ACGTCGAACG CGCCGGCGGC
GAACAAGCCG TCGAAGACGG CAAACAGAAA CTCCTCGCCA CCGTCGTCGG ACACCGACTC
GCCGAAGTAC GCCGCACTCG CGGCCTGACC CAACAGCAGG TCGCCGACCG CATGGGCGTC
ACCAAAGGCC GCATCTCCCA GATCGAACAA GGCAAGATCT CCGGCCAAGA CATCGTCGCC
CGATACGCCA CCGCCCTCGG CGGACGCCTC CACCAAGCCA TCTACTTCGA CGACGGCAAC
ATCGCCGCCA TCGCATAG
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| Protein sequence | MAPDEWEIYL VNEVQEWMDG LDPLTHARVV QAIDLLAEAG PGLGRPLVDT IHGSALANLK
ELRPATVRIL FAFDPWRSSI LLVAGDKAGR WQQWYTPSDP PGRATLRDLP QGTRQGGPTT
MNSYTRWSDI RTTHVERAGG EQAVEDGKQK LLATVVGHRL AEVRRTRGLT QQQVADRMGV
TKGRISQIEQ GKISGQDIVA RYATALGGRL HQAIYFDDGN IAAIA
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