| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1308 |
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| Symbol | trmD |
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| ID | 5057761 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 1472233 |
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| End bp | 1473006 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640473580 |
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| Product | tRNA (guanine-N(1)-)-methyltransferase |
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| Protein accession | YP_001158156 |
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| Protein GI | 145593859 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0336] tRNA-(guanine-N1)-methyltransferase |
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| TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGTTG ACGTCGTGTC GATCTTCCCG GAGTACTTCG CTCCGCTGGA CCTGTCGCTG
ATCGGCCGGG CCCGGGCCAG CGGCACACTC CAGCTGGCCG TGCACGACCT CCGTACCTGG
ACGCACGACG TGCATCGGAC GGTCGACGAC ACGCCGTACG GCGGGGGACC GGGGATGGTG
ATGCGGCCGG AGCCGTGGGG GGAGGCGCTG GAGGCGCTCG CCCCGCCGGG AGGCAACCCG
CCGCGGCTGC TGGTGCCCAC GCCGGCCGGT GCTCCGTTCA CCCAGGCGCT GGCCCACGAA
CTGGCCGCCG AGCCGCACCT CCTCTTCGCC TGTGGCCGGT ACGAGGGGAT CGACCAGCGG
GTGCTCGAGC ACGCCGCGAG TCGGATGCCG GTCACCGAGG TCTCGCTCGG CGACTATGTG
CTCTTCGGCG GCGAGGTGGC GGTGCTGGTG ATTCTGGAGG CGGTGACCCG GCTGCTGCCC
GGGGTGCTCG GCAACGTCGG CTCGCTGGAC GACGAGTCGC ACGCCCACGG GCTGCTGGAG
GCACCGATGT ACACCAAACC GGCTGTCTGG CGGGGCCAGG AGGTGCCAAC GGTGCTTCGC
TCCGGGGACC ATGGGAAGAT CGCCCGCTGG CGCCGGGACG AGGCCCTCGC GCGGACAGTC
GCCCGACGAC CGGACATGAT CGCCGCGCTG CCTCCAGAGT GCCTGGACCC GCGGGACCGG
GCGGCGCTGG AGCGGGCCGG GTTCCCGGAC CCGCCGGAGG GTGTGGCAAA ATAA
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| Protein sequence | MRVDVVSIFP EYFAPLDLSL IGRARASGTL QLAVHDLRTW THDVHRTVDD TPYGGGPGMV
MRPEPWGEAL EALAPPGGNP PRLLVPTPAG APFTQALAHE LAAEPHLLFA CGRYEGIDQR
VLEHAASRMP VTEVSLGDYV LFGGEVAVLV ILEAVTRLLP GVLGNVGSLD DESHAHGLLE
APMYTKPAVW RGQEVPTVLR SGDHGKIARW RRDEALARTV ARRPDMIAAL PPECLDPRDR
AALERAGFPD PPEGVAK
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