| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Strop_1301 |
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| Symbol | |
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| ID | 5057754 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora tropica CNB-440 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009380 |
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| Strand | + |
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| Start bp | 1465598 |
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| End bp | 1467142 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640473573 |
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| Product | signal recognition particle protein |
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| Protein accession | YP_001158149 |
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| Protein GI | 145593852 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0541] Signal recognition particle GTPase |
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| TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.556432 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.548465 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTTGACA CCTTGAGTGA CCGCCTGTCC GGGATCTTCA CCAAGCTCCG CGGTAAGGGA
CGGCTCACCG ACGCCGACAT CGACGCCACC GCCCGCGAGA TCCGCCTCGC GCTGCTGGAG
GCGGACGTGG CGCTGCCGGT GGTCAAGGGC TTCATCGCGC GGGTCAAGGA GCGGGCGCGG
GGCGCCGAGG TCTCCCAGGC GCTGAACCCG GCCCAGCAGA TCGTCAAGAT CGTCAATGAG
GAGTTGGTCA ACGTCCTCGG TGGTGAGGCG CGGCGGCTTC AGCTCGCCAA GCAACCGCCG
ACCGTGATCA TGCTGGCCGG TCTCCAGGGC TCCGGTAAGA CCACGCTCGC CGGCAAGCTG
GCCAGCTGGC TGCGCGGCCA GGGCCACCAG CCGCTGCTGG TCGCCGCCGA CCTGCAACGT
CCCAACGCCG TCGGGCAGCT CCAGGTGCTC GGTGGTCGCG CCGGCGTCGA GGTGTACTCG
CCGGAGCCCG GCAACGGCGT TGGCGACCCG GTGCAGGTGG CCCGCGCCTC GATCGAGCAC
GCTCGTCGGG CGGCCCGGGA CATCGTCATC GTCGACACGG CCGGCCGTCT CGGTATCGAC
GCCGAGATGA TGCAGCAGGC CGCCGACATC CGGGACGCGG TCAACCCGGA CGAGGTCATC
TTCGTCATCG ACGCCATGGT CGGCCAGGAC GCGGTGCGCA CCGCGGAGGC GTTCCGGGAT
GGAGTCGGCA TCACCGGCGT GGTCCTCTCC AAGCTCGACG GTGACGCCCG TGGTGGTGCC
GCGCTGTCGG TCCGGGAGGT CACCGGCCAG CCGATCCTCT TTGCCTCCAC CGGCGAGAAG
CTGGAGGACT TCGATGTCTT CCACCCGGAC CGGATGGCCA GCCGGATTCT CGGCATGGGC
GATGTTCTCA CCCTGATCGA GCAGGCCGAA CAGGCCTTCG ACGTCGATCA GAAAGAGAAG
ATGACCGCCA AGCTGATGGG CGGTGAGCAG TTCACCCTGG AGGACTTCCT CGACCAGCTC
ATCGCGGTTC GGCGGATGGG GCCGATCGCC AACGTGCTGG CCATGATGCC CGGCATGGGG
CAGATGAAAG ACCAGCTCGC CGAGGTGGAC GACAAGCACT TCGACCGGGT CACCGCGATC
ATCCGGTCGA TGACCCCGGC CGAGCGCACC AACCCGAAGA TCATCAACGG CTCGCGCCGG
GCCCGCATCG CCAACGGCTC CGGGGTCACC GTGATGGACG TCAACCAGCT CCTCAACCGC
TTCACCGACG CCCAGAAGAT GATGAAGCAG ATGGGCGGCA TGATGGGTCT GCCCGGAGGG
CGCCGAAAGG CGACCAAGTC GCCGAAGAAC AAGCGCAAGG GCGGGAAGGG TGGCGGTCGG
TCGCGGGCCG GCACGGGGGC GCGGGGCGGC TTCCCCGGTG GCATGCCGCA GCTGCCGCCC
GGCCTGGGCC CCGACGACCT GGCCGGCCAG GGGCTACCAC CGGGATTCAA GCTCCCGAAG
ATCGACTTCA ACAAGCTCGG CAAGGGGGAT CAGCGCCCCC GTTGA
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| Protein sequence | MFDTLSDRLS GIFTKLRGKG RLTDADIDAT AREIRLALLE ADVALPVVKG FIARVKERAR
GAEVSQALNP AQQIVKIVNE ELVNVLGGEA RRLQLAKQPP TVIMLAGLQG SGKTTLAGKL
ASWLRGQGHQ PLLVAADLQR PNAVGQLQVL GGRAGVEVYS PEPGNGVGDP VQVARASIEH
ARRAARDIVI VDTAGRLGID AEMMQQAADI RDAVNPDEVI FVIDAMVGQD AVRTAEAFRD
GVGITGVVLS KLDGDARGGA ALSVREVTGQ PILFASTGEK LEDFDVFHPD RMASRILGMG
DVLTLIEQAE QAFDVDQKEK MTAKLMGGEQ FTLEDFLDQL IAVRRMGPIA NVLAMMPGMG
QMKDQLAEVD DKHFDRVTAI IRSMTPAERT NPKIINGSRR ARIANGSGVT VMDVNQLLNR
FTDAQKMMKQ MGGMMGLPGG RRKATKSPKN KRKGGKGGGR SRAGTGARGG FPGGMPQLPP
GLGPDDLAGQ GLPPGFKLPK IDFNKLGKGD QRPR
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