Gene Strop_1216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagStrop_1216 
Symbol 
ID5057666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora tropica CNB-440 
KingdomBacteria 
Replicon accessionNC_009380 
Strand
Start bp1370004 
End bp1370540 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content70% 
IMG OID640473485 
Producthypothetical protein 
Protein accessionYP_001158064 
Protein GI145593767 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCCGCA CCTACCCCGC CGAGCAGTAC GAACGCTGGT TCGTCCGCGA CTGCGGCCGC 
CGCGGCCGCC GCAGCAACTC CACTACCCGG TGGTCCGATG GGCAGGTCTG CCGCAGGTGC
CAGGACCGGT CGTTCCGCAC CCAGGGCCGC TGCCCTGGCT GCGGCGACGA CGACCGGATC
CTAGCCGGAG TCCGCACCGA GGACCAGATT CCGCTCTGCG CCGGCTTCTC GATCTCGTAT
GCCTGCATCG AGTGCAGGCG GGAGGGCAAG CTGCACGCCG GCCGCCGGAG CATCCGCTGC
ACGTTCACTC GACGCGTCAC CGAACTCCTC GACGACGACA CCGGCCGCAT CCGTCCCGAA
CCGGCACCGC TGGCCGAGCT GCTGACCGGC ATGAACAACC CGTTCACCGG CCTATCCTGG
ATCTCTTCCC GGCACGGCCG CTCCGAATTC CAGACAGTTC AAGTACACGA CCCTGCCAGT
CGGGCGGGGC GGTGGGCGGC GCCATGTCTC ACCGCCCCGA TACGGTTCCC GGGGTAG
 
Protein sequence
MGRTYPAEQY ERWFVRDCGR RGRRSNSTTR WSDGQVCRRC QDRSFRTQGR CPGCGDDDRI 
LAGVRTEDQI PLCAGFSISY ACIECRREGK LHAGRRSIRC TFTRRVTELL DDDTGRIRPE
PAPLAELLTG MNNPFTGLSW ISSRHGRSEF QTVQVHDPAS RAGRWAAPCL TAPIRFPG